Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30040
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ252203-1|CAB64656.1|  219|Drosophila melanogaster putative COQ...    29   6.4  
AJ252202-1|CAB64655.1|  219|Drosophila melanogaster putative COQ...    29   6.4  
AE014298-949|AAF46199.2|  219|Drosophila melanogaster CG14437-PA...    29   6.4  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    28   8.5  

>AJ252203-1|CAB64656.1|  219|Drosophila melanogaster putative COQ7
           isologue protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 396 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 485
           +Q    T  D      PFY   TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209


>AJ252202-1|CAB64655.1|  219|Drosophila melanogaster putative COQ7
           isologue protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 396 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 485
           +Q    T  D      PFY   TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209


>AE014298-949|AAF46199.2|  219|Drosophila melanogaster CG14437-PA
           protein.
          Length = 219

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 396 DQNSIPTNADSTRTPVPFYFCCTECIKFGC 485
           +Q    T  D      PFY   TE IKFGC
Sbjct: 180 EQEHHDTGIDHGAEQAPFYQAMTEVIKFGC 209


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +1

Query: 358 FIYIICATETKWRIKIR-YLPTLIQRGHLC 444
           +IY++C T+  +  KIR Y   L QR  LC
Sbjct: 97  YIYLVCITQIIFFFKIRKYAGNLCQRASLC 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,364,178
Number of Sequences: 53049
Number of extensions: 442766
Number of successful extensions: 1291
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)