Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10495
(786 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 89 8e-18
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 77 2e-14
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 75 1e-13
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 75 1e-13
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 75 1e-13
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 75 1e-13
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 75 1e-13
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 75 1e-13
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 72 1e-12
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 72 1e-12
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 72 1e-12
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 72 1e-12
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 69 1e-11
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 68 1e-11
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 68 1e-11
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 68 2e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 68 2e-11
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 66 5e-11
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 63 5e-10
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 44 2e-04
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 39 0.007
AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p pro... 34 0.25
AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-P... 34 0.25
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 33 0.44
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 33 0.58
M71249-1|AAA28501.1| 188|Drosophila melanogaster cuticle protei... 31 1.8
AE014297-496|AAF54097.2| 188|Drosophila melanogaster CG2345-PA ... 31 1.8
AE001572-20|AAD19810.1| 188|Drosophila melanogaster pupal-cutic... 31 1.8
AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-P... 30 4.1
AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA ... 29 5.4
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 29 9.5
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 88.6 bits (210), Expect = 8e-18
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H V+Q+HR+ E IL + + Y +LF D+ +AFD+VWH GL K+
Sbjct: 548 QFGFRAGHCTVEQLHRVVEQILTAYDSKE--YCNSLFLDIREAFDRVWHIGLQLKI-KQT 604
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEGP-APPHDLSQLESRKALSSHPSYLAYSSTIFPGRRR 360
+P +++ +L R F R + H+++ + ++ Y YS + +
Sbjct: 605 LPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDM---PQP 661
Query: 361 PI*LYSPTTRLFTILVEISP*SRRSFRAQPSPRTVVPKMAHRHQPSEKYSVLFQXXXXXX 540
+ LY + L T ++ + RS R + + A+R + +
Sbjct: 662 DVSLYG-KSMLATFADDVCV-TYRS-RCEHDAADGIQDFAYRFSEWARRWNIGINSSKSN 718
Query: 541 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 720
PP+ + P+P KYLGV LD +TF H+ +R R + + Y
Sbjct: 719 NVCFTLKRRTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYW 778
Query: 721 MICKRSKMSFGTR*TL 768
++ RSK+S + T+
Sbjct: 779 LLSSRSKLSLSNKLTI 794
Score = 30.7 bits (66), Expect = 2.4
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 234 FSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSP-----PTHLALFADDTTVY 398
F++ S+ + AGVPQG +D+P+ + LA FADD V
Sbjct: 622 FAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVT 681
Query: 399 YSSRNKSLIAKKLQSAA 449
Y SR + A +Q A
Sbjct: 682 YRSRCEHDAADGIQDFA 698
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 77.4 bits (182), Expect = 2e-14
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR +H ++QV+R+T I + Y A+F DV++AFDKVW +GL+FK+ +
Sbjct: 546 QFGFRESHGTIEQVNRITTEIRTAFEYRE--YCTAVFLDVSQAFDKVWLDGLMFKI-KIS 602
Query: 184 VPDSLVLIIRDFLSNRSFRYRIE-GPAPPHDLSQLESRKALSSHPSYLAYSSTIFPGRRR 360
+P+S +++ +L +R F R + H + + ++ YL Y++ I R
Sbjct: 603 LPESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRL 662
Query: 361 PI*LYSPTTRLFTILVEISP*SRRSFRAQPSPRTVVPKMAHRHQPSEKYSVLFQXXXXXX 540
+ ++ T + SR Q + + + + + S+ + +
Sbjct: 663 TVSTFADDTAIL---------SRSRSPIQATAQLALYLIDIKKWLSD-WRIKVNEQKCKH 712
Query: 541 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 720
+ P + L P+P A +V YLGV LD +T+R HI++ + + L+
Sbjct: 713 VTFTLNRQDCPP-LLLNSIPLPKADEVTYLGVHLDRRLTWRRHIEAKKTQLKLKANNLHW 771
Query: 721 MICKRSKMSFGTR*TLQN 774
+I S +S + L N
Sbjct: 772 LINSGSPLSLDHKVLLYN 789
Score = 33.5 bits (73), Expect = 0.33
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 219 LVEPLFSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY 398
L + F++ S+ + AGVPQG DIP + ++ FADDT +
Sbjct: 615 LYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADIPTNSRLTVSTFADDTAIL 674
Query: 399 YSSRN 413
SR+
Sbjct: 675 SRSRS 679
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 74.9 bits (176), Expect = 1e-13
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR HS V+QVHRLT+HIL + + Y A+F D+ +AFD+VWH+GLI K+ +
Sbjct: 549 QFGFRQGHSTVEQVHRLTKHILQAFDDKE--YCNAVFIDMQQAFDRVWHDGLISKVKKL- 605
Query: 184 VPDSLVLIIRDFLSNRSFRYRI 249
P +++ +L +R F R+
Sbjct: 606 FPAPYYGVLKSYLEDRRFMVRV 627
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 568 LTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMS 747
+T PI L + + KYLG+TLD +TF PH+K+ R + +L ++ ++S M+
Sbjct: 734 VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMT 793
Score = 33.1 bits (72), Expect = 0.44
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Frame = +3
Query: 234 FSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LALFADDT 389
F + R + S PR + AGVPQG D+P H LA +ADD
Sbjct: 623 FMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDI 682
Query: 390 TVYYSSRNKSLIAKKLQ 440
+ YSS + A+ LQ
Sbjct: 683 ALLYSSNCCNEAARGLQ 699
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 650 LPYNLYIILESYLTNRTFEVK 670
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ T+
Sbjct: 789 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTK 843
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 533
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 534 LPYNLYIILESYLTNRTFEVK 554
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ T+
Sbjct: 673 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTK 727
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 661
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 662 LPYNLYIILESYLTNRTFEVK 682
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGVTLD+ +T H+ + + + +L ++ RSK+ T+
Sbjct: 801 QTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWILNGRSKLPTKTK 855
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 650 LPYNLYIILESYLTNRTFEVK 670
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ T+
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTK 843
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 650 LPYNLYIILESYLTNRTFEVK 670
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ T+
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTK 843
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 611
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 612 LPYNLYIILESYLTNRTFEVK 632
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ T+
Sbjct: 751 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTK 805
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 74.5 bits (175), Expect = 1e-13
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+VWH GL+ KL +
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRVWHEGLLLKLAKI- 649
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P +L +I+ +L+NR+F +
Sbjct: 650 LPYNLYIILESYLTNRTFEVK 670
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T PH+ V + ++ ++ +RSK+ T+
Sbjct: 789 QAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTK 843
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL +
Sbjct: 149 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 205
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEG 255
+P L ++ ++LSNR+F RI+G
Sbjct: 206 IPRYLFDLLENYLSNRTFSVRIDG 229
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEG 255
+P L ++ ++LSNR+F RI+G
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDG 676
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEG 255
+P L ++ ++LSNR+F RI+G
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDG 676
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 71.7 bits (168), Expect = 1e-12
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR +H Q+ R+T+ IL + A F D+ +AFD+VWH+GL++KL +
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITEAFDRVWHDGLLYKLSRL- 652
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEG 255
+P L ++ ++LSNR+F RI+G
Sbjct: 653 IPRYLFDLLENYLSNRTFSVRIDG 676
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 68.5 bits (160), Expect = 1e-11
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+FK+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 184 VPDSLVLIIRDFLSNRSFRYRIE 252
+P + +++ +L NR F R +
Sbjct: 601 LPQNTHKLLKSYLYNRVFAIRCD 623
Score = 39.1 bits (87), Expect = 0.007
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +1
Query: 574 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFG 753
PP+ L IP A +V YLGV LD +T+R HI++ L+ +I RS +S
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 754 TR*TLQN 774
+ L N
Sbjct: 781 FKALLYN 787
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 68.1 bits (159), Expect = 1e-11
Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 1/253 (0%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
Q+GFR + + +L +I + + + G + D+ AFD VWH+GL+ KL +G
Sbjct: 573 QYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIG 630
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEGPAPPHDLSQLESRKALSSHPS-YLAYSSTIFPGRRR 360
P L+ I+++FL++R F + + + P+ + ++ I
Sbjct: 631 TPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNC 690
Query: 361 PI*LYSPTTRLFTILVEISP*SRRSFRAQPSPRTVVPKMAHRHQPSEKYSVLFQXXXXXX 540
+ L++ +++ S ++ K + P++ ++ F
Sbjct: 691 VLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPR 750
Query: 541 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 720
L PI W ++YLG+ D +TF+ HI + + I+ LYP
Sbjct: 751 YLPDRQLRILDSPI-------QWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYP 803
Query: 721 MICKRSKMSFGTR 759
+I ++SK+S +
Sbjct: 804 LINRKSKLSISNK 816
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +3
Query: 219 LVEPLFSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY 398
L FS++ ++S+ R L AGVPQG +DIP++ L+LFADD VY
Sbjct: 643 LTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 702
Query: 399 YSSRNKSLIAKKLQS 443
+ + S I + +QS
Sbjct: 703 SAGFSYSEINQSMQS 717
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 68.1 bits (159), Expect = 1e-11
Identities = 53/253 (20%), Positives = 105/253 (41%), Gaps = 1/253 (0%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
Q+GFR + + +L +I + + + G + D+ AFD VWH+GL+ KL +G
Sbjct: 521 QYGFRNGLNTILPTLKLRNYIKESIQSKQSV--GLVTLDIEAAFDTVWHDGLLHKLKMIG 578
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEGPAPPHDLSQLESRKALSSHPS-YLAYSSTIFPGRRR 360
P L+ I+++FL++R F + + + P+ + ++ I
Sbjct: 579 TPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNC 638
Query: 361 PI*LYSPTTRLFTILVEISP*SRRSFRAQPSPRTVVPKMAHRHQPSEKYSVLFQXXXXXX 540
+ L++ +++ S ++ K + P++ ++ F
Sbjct: 639 VLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFTKRRKPR 698
Query: 541 XXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYP 720
L PI W ++YLG+ D +TF+ HI + + I+ LYP
Sbjct: 699 YLPDRQLRILDSPI-------QWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKIICTLYP 751
Query: 721 MICKRSKMSFGTR 759
+I ++SK+S +
Sbjct: 752 LINRKSKLSISNK 764
Score = 47.6 bits (108), Expect = 2e-05
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = +3
Query: 219 LVEPLFSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVY 398
L FS++ ++S+ R L AGVPQG +DIP++ L+LFADD VY
Sbjct: 591 LTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHDIPQATNCVLSLFADDAAVY 650
Query: 399 YSSRNKSLIAKKLQS 443
+ + S I + +QS
Sbjct: 651 SAGFSYSEINQSMQS 665
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H +Q+HR+ L + + Y F D+ +AFD+VWH GL++K +
Sbjct: 550 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 606
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEG 255
P L L+++ FL R+F ++G
Sbjct: 607 FPPQLYLVVKSFLEERTFHVSVDG 630
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 574 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFG 753
P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+K+S G
Sbjct: 735 PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLG 794
Query: 754 TR 759
+
Sbjct: 795 CK 796
Score = 38.3 bits (85), Expect = 0.012
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +3
Query: 219 LVEPLFSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LAL 374
L E F +S G +SS +P+ AGVPQG +D+P P +A
Sbjct: 619 LEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIAT 678
Query: 375 FADDTTVYYSSRNKSLIA 428
+ADDT V +++KS++A
Sbjct: 679 YADDTAVL--TKSKSILA 694
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/84 (35%), Positives = 47/84 (55%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H +Q+HR+ L + + Y F D+ +AFD+VWH GL++K +
Sbjct: 352 QFGFRLQHGTPEQLHRVVNFALEAMENKE--YAVGAFLDIQQAFDRVWHPGLLYKAKRL- 408
Query: 184 VPDSLVLIIRDFLSNRSFRYRIEG 255
P L L+++ FL R+F ++G
Sbjct: 409 FPPQLYLVVKSFLEERTFHVSVDG 432
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 574 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFG 753
P ++L + I + KYLG+TLD +TF HI +++ + R+ +I R+K+S G
Sbjct: 537 PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLG 596
Query: 754 TR 759
+
Sbjct: 597 CK 598
Score = 38.3 bits (85), Expect = 0.012
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +3
Query: 219 LVEPLFSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTH--------LAL 374
L E F +S G +SS +P+ AGVPQG +D+P P +A
Sbjct: 421 LEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIAT 480
Query: 375 FADDTTVYYSSRNKSLIA 428
+ADDT V +++KS++A
Sbjct: 481 YADDTAVL--TKSKSILA 496
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 66.1 bits (154), Expect = 5e-11
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+VW +GL+FK+ +
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRVWLDGLLFKIIKL- 600
Query: 184 VPDSLVLIIRDFLSNRSFRYRIE 252
+P + +++ +L N F R +
Sbjct: 601 LPQNTHKLLKSYLYNTVFAIRCD 623
Score = 39.1 bits (87), Expect = 0.007
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +1
Query: 574 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFG 753
PP+ L IP A +V YLGV LD +T+R HI++ L+ +I RS +S
Sbjct: 721 PPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIEAKSKHLKLKARNLHWLINARSPLSLE 780
Query: 754 TR*TLQN 774
+ L N
Sbjct: 781 FKALLYN 787
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 62.9 bits (146), Expect = 5e-10
Identities = 30/81 (37%), Positives = 48/81 (59%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
QF F H ++QV+R+T I + Y ALF DVA+AFD+VW +GL+FK+ +
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHRE--YCTALFLDVAQAFDRVWLDGLMFKIIQL- 141
Query: 184 VPDSLVLIIRDFLSNRSFRYR 246
+P ++ +++ +L R F R
Sbjct: 142 LPQNIHKLLKSYLDKRVFAVR 162
Score = 33.1 bits (72), Expect = 0.44
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +3
Query: 231 LFSISNRGTRSSPRPLTAGVPQGXXXXXXXXXXXXNDIPRSPPTHLALFADDTTVYYSSR 410
+F++ + SS + AGVPQG DIP + + FADDT + SR
Sbjct: 158 VFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADIPTNYQLTIFTFADDTAIISRSR 217
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +1
Query: 4 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKVWHNGLIFKLFNMG 183
Q F++NHS + + R+ L+ + L D +AFD+V + ++ +L G
Sbjct: 548 QVAFKSNHSTMDALLRIQHFASNALSTKN--HVSILATDFERAFDRVGIHAVLCRLERWG 605
Query: 184 VPDSLVLIIRDFLSNRSFRYRI 249
+ L +I+ F++NRSFR RI
Sbjct: 606 IGPRLYNLIKAFMTNRSFRVRI 627
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 574 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRL 714
P + + +P+ R +YLG+T+ M F HI S+R R ++G L
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGAL 765
>AY069347-1|AAL39492.1| 396|Drosophila melanogaster LD05576p
protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -2
Query: 260 AGPSIRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGR 81
+ P +RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 27 SAPMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAA 86
Query: 80 LSPT 69
PT
Sbjct: 87 KDPT 90
>AE014134-3030|AAF53752.1| 396|Drosophila melanogaster CG10495-PA
protein.
Length = 396
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -2
Query: 260 AGPSIRYRKERFDKKSRMMSTRLSGTPMLNSLKIKPLCQTLSNAFATSKKRAPVYNGFGR 81
+ P +RY K F + R+ +L+ TPM+ S I + N F+T P+ F
Sbjct: 27 SAPMVRYSKLEFRRLVRLNGVQLAFTPMMISDSINNSEKARQNEFSTGADDQPLIAQFAA 86
Query: 80 LSPT 69
PT
Sbjct: 87 KDPT 90
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 94 LYTGALFFDVAKAFDKVWHNGLIFKLFNMGVPDSLVLIIRDFLSNRSFRYRIEGP 258
++T + D ++AFD+V + +I +L ++ I++F+SNR R+ GP
Sbjct: 568 MHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKYIKNFMSNRKITVRV-GP 621
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 32.7 bits (71), Expect = 0.58
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Frame = +1
Query: 1 EQFGFRTNHSCVQQVHRLTEHILVGLNRPKPL-----YTGALFFDVAKAFDKVWHNGLIF 165
+Q+GFR S + + +T+ L+ + L Y + DV AF+ ++
Sbjct: 513 QQYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILG 572
Query: 166 KLFNMGVPDSLVLIIRDFLSNRSFRYRIEGPAPPHDLS 279
+ N+GVPD + +I ++ +R Y E H +S
Sbjct: 573 AMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSHQVS 610
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 610 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 726
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>M71249-1|AAA28501.1| 188|Drosophila melanogaster cuticle protein
protein.
Length = 188
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +1
Query: 232 SFRYRIEGPAPPHDLSQLESRKALSSHPSYLAYSSTIFPGRRRPI*LYSPTTRLFTILVE 411
SF Y ++ P SQ ESR H YS G RR + + R F +V
Sbjct: 38 SFNYDVQDPETGDVKSQSESRDGDVVHGQ---YSVNDADGYRRTVDYTADDVRGFNAVVR 94
Query: 412 ISP*SRRSFRAQPSPRTVVPKM 477
P S + +P VVPK+
Sbjct: 95 REPLSSAAVVVKPQATAVVPKV 116
>AE014297-496|AAF54097.2| 188|Drosophila melanogaster CG2345-PA
protein.
Length = 188
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +1
Query: 232 SFRYRIEGPAPPHDLSQLESRKALSSHPSYLAYSSTIFPGRRRPI*LYSPTTRLFTILVE 411
SF Y ++ P SQ ESR H YS G RR + + R F +V
Sbjct: 38 SFNYDVQDPETGDVKSQSESRDGDVVHGQ---YSVNDADGYRRTVDYTADDVRGFNAVVR 94
Query: 412 ISP*SRRSFRAQPSPRTVVPKM 477
P S + +P VVPK+
Sbjct: 95 REPLSSAAVVVKPQATAVVPKV 116
>AE001572-20|AAD19810.1| 188|Drosophila melanogaster
pupal-cuticle-protein protein.
Length = 188
Score = 31.1 bits (67), Expect = 1.8
Identities = 25/82 (30%), Positives = 33/82 (40%)
Frame = +1
Query: 232 SFRYRIEGPAPPHDLSQLESRKALSSHPSYLAYSSTIFPGRRRPI*LYSPTTRLFTILVE 411
SF Y ++ P SQ ESR H YS G RR + + R F +V
Sbjct: 38 SFNYDVQDPETGDVKSQSESRDGDVVHGQ---YSVNDADGYRRTVDYTADDVRGFNAVVR 94
Query: 412 ISP*SRRSFRAQPSPRTVVPKM 477
P S + +P VVPK+
Sbjct: 95 REPLSSAAVVVKPQATAVVPKV 116
>AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-PA
protein.
Length = 511
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = -2
Query: 296 LRDSSCERSWGGAGPSIR-YRKERFDKKSRMMSTRLSGTPMLNSL-KIKPLCQTLSNAFA 123
L SC+ WG AGP + +R + + M S + ML L + P+ N F
Sbjct: 242 LEKPSCKEPWGKAGPGGKPWRSPKEVGNTFMKSLGWTNKEMLKELDQDNPVTPAEKNTFR 301
Query: 122 TSKKRAPVYNGFGRLSPTRMCSVRRCTC 39
S+ P P R C + C C
Sbjct: 302 KSRPGKPP-------KPQRCCELCTCKC 322
>AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA
protein.
Length = 753
Score = 29.5 bits (63), Expect = 5.4
Identities = 25/81 (30%), Positives = 39/81 (48%)
Frame = +1
Query: 247 IEGPAPPHDLSQLESRKALSSHPSYLAYSSTIFPGRRRPI*LYSPTTRLFTILVEISP*S 426
+ GP P +S L++ ++ P+ ++ SS PG + SP T+L ++ I+P S
Sbjct: 320 VAGPVGPTAMSSLQT---VAMSPASISVSS---PGMMS---VGSPLTQLSSLQTSITPPS 370
Query: 427 RRSFRAQPSPRTVVPKMAHRH 489
SF A P P AH H
Sbjct: 371 AGSFPAPPPPNA----FAHHH 387
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 595 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSFGTR 759
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ T+
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTK 58
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,766,396
Number of Sequences: 53049
Number of extensions: 844525
Number of successful extensions: 2395
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2376
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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