Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10460
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    37   0.023
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    37   0.023
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    36   0.040
BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p pro...    33   0.37 
BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p pro...    33   0.37 
AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA...    33   0.37 
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    31   1.1  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    31   1.1  
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    31   2.0  
AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA ...    30   3.5  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 620 ALKAQRKVVKGEHGKRVRKIRNSVHF 697
           A K Q+K++KG  G R RKIR +VHF
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHF 159


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 620 ALKAQRKVVKGEHGKRVRKIRNSVHF 697
           A K Q+K++KG  G R RKIR +VHF
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHF 167


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 36.3 bits (80), Expect = 0.040
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 620 ALKAQRKVVKGEHGKRVRKIRNSVHF 697
           A K Q+K++KG  G R RKIR +VHF
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHF 167


>BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p
           protein.
          Length = 481

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + T + PE S + PE S + PE + + PE S   P+
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194



 Score = 32.3 bits (70), Expect = 0.65
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + + + PE S + PE + + PE S + PE S   P+
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201



 Score = 31.9 bits (69), Expect = 0.86
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + T + PE + + PE S + PE S + PE +   P+
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEETTSAPE 187



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCP 245
           + T + PE S + PE S + PE + + PE S   P
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAP 214



 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           + T + PE + + PE + + PE S + PE S   P+
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           Q + + PE + + PE + + PE + + PE S   P+
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           + + + PE + + PE S + PE S + PE +   P+
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEETTSAPE 208



 Score = 29.1 bits (62), Expect = 6.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCP 245
           T   + + + PE S + PE + + PE S + P+ +   P
Sbjct: 183 TSAPEESSSAPEESSSAPEETTSAPEESSSAPDQTSSAP 221


>BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p
           protein.
          Length = 481

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + T + PE S + PE S + PE + + PE S   P+
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194



 Score = 32.3 bits (70), Expect = 0.65
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + + + PE S + PE + + PE S + PE S   P+
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201



 Score = 31.9 bits (69), Expect = 0.86
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + T + PE + + PE S + PE S + PE +   P+
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEETTSAPE 187



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCP 245
           + T + PE S + PE S + PE + + PE S   P
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAP 214



 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           + T + PE + + PE + + PE S + PE S   P+
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           Q + + PE + + PE + + PE + + PE S   P+
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           + + + PE + + PE S + PE S + PE +   P+
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEETTSAPE 208



 Score = 29.1 bits (62), Expect = 6.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCP 245
           T   + + + PE S + PE + + PE S + P+ +   P
Sbjct: 183 TSAPEESSSAPEESSSAPEETTSAPEESSSAPDQTSSAP 221


>AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA
           protein.
          Length = 481

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + T + PE S + PE S + PE + + PE S   P+
Sbjct: 155 TSAPEETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194



 Score = 32.3 bits (70), Expect = 0.65
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + + + PE S + PE + + PE S + PE S   P+
Sbjct: 162 TSAPEESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201



 Score = 31.9 bits (69), Expect = 0.86
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           T   + T + PE + + PE S + PE S + PE +   P+
Sbjct: 148 TSAPEETTSAPEETTSAPEESSSAPEESSSAPEETTSAPE 187



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCP 245
           + T + PE S + PE S + PE + + PE S   P
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAP 214



 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           + T + PE + + PE + + PE S + PE S   P+
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           Q + + PE + + PE + + PE + + PE S   P+
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +3

Query: 141 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 248
           + + + PE + + PE S + PE S + PE +   P+
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEETTSAPE 208



 Score = 29.1 bits (62), Expect = 6.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESSCLCP 245
           T   + + + PE S + PE + + PE S + P+ +   P
Sbjct: 183 TSAPEESSSAPEESSSAPEETTSAPEESSSAPDQTSSAP 221


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 670 NSLPMFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 566
           N   M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 364 NMSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 670 NSLPMFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 566
           N   M+  Y+ P  LK  +NR H+F L+L   + G
Sbjct: 364 NMSAMYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 620 ALKAQRKVVKGEHGKRVRKIRNSVHF 697
           A K Q+K++K   G R RKIR +VHF
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHF 159


>AE013599-929|AAF58897.1| 1127|Drosophila melanogaster CG1625-PA
           protein.
          Length = 1127

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 129 TCVSQNTGTCPESSCACPEISCACPETSCACPESS 233
           TC ++++ T   +  +  ++ CAC   SC   ESS
Sbjct: 247 TCSTRSSSTTSTNEASASDVKCACDAPSCRFMESS 281


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,896,540
Number of Sequences: 53049
Number of extensions: 218564
Number of successful extensions: 982
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)