Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10447X
(436 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 79 3e-15
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 79 3e-15
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 79 3e-15
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 63 2e-10
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 46 3e-05
AY071651-1|AAL49273.1| 608|Drosophila melanogaster RE72625p pro... 29 2.7
AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p pro... 29 2.7
AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembran... 29 2.7
AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative mul... 29 2.7
AE014296-2796|AAF49415.1| 608|Drosophila melanogaster CG13025-P... 29 2.7
AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB... 29 2.7
AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA... 29 2.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1
Query: 256 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLG 435
R RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNVLKLAPGGHVG 250
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 158 SGQVQEINKTKQAVIFLRRLKAWSDILKVYKSRVF 262
S +VQ++ KTKQAVIFLRRLK W+DI KVYKS+ F
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRF 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 3 APTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKSRR 176
APTK +RRWH Q++GH+I+ + E PLVV+D+ ++
Sbjct: 106 APTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1
Query: 256 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLG 435
R RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG 250
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 158 SGQVQEINKTKQAVIFLRRLKAWSDILKVYKSRVF 262
S +VQ++ KTKQAVIFLRRLK W+DI KVYKS+ F
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRF 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 3 APTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKSRR 176
APTK +RRWH Q++GH+I+ + E PLVV+D+ ++
Sbjct: 106 APTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1
Query: 256 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIPGVEXXXXXXXXXXXXAPGGHLG 435
R RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIPG+E APGGH+G
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIPGIETINVDKLNLLKLAPGGHVG 250
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 158 SGQVQEINKTKQAVIFLRRLKAWSDILKVYKSRVF 262
S +VQ++ KTKQAVIFLRRLK W+DI KVYKS+ F
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRF 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 3 APTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKSRR 176
APTK +RRWH Q++GH+I+ + E PLVV+D+ ++
Sbjct: 106 APTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/38 (65%), Positives = 34/38 (89%)
Frame = +1
Query: 256 RLRAGKGKMRNRRRIQRKGPLIIFNKDQGLTRAFRNIP 369
R RAG+G MR+RRRI R+GPL++++KD+GL +AFRNIP
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGLRKAFRNIP 228
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 158 SGQVQEINKTKQAVIFLRRLKAWSDILKVYKSRVF 262
S +VQ++ KTKQAVIFLRRLK W+DI KVYKS+ F
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRF 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 3 APTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKSRR 176
APTK +RRWH Q++GH+I+ + E PLVV+D+ ++
Sbjct: 106 APTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 163
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 158 SGQVQEINKTKQAVIFLRRLKAWSDILK 241
S +VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 96 SDEVQKVQKTKQAVIFLRRLKIWADIQK 123
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 3 APTKPWRRWHXXXXXXXXXXXXXXXXXXXXXXXXXQARGHIIEKIPELPLVVADKSRR 176
APTK +RRWH Q++GH+I+ + E PLVV+D+ ++
Sbjct: 44 APTKTFRRWHRRVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 101
>AY071651-1|AAL49273.1| 608|Drosophila melanogaster RE72625p
protein.
Length = 608
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 126 IEKIPE-LPLVVADKSRRSTRPNRLSSS*GASRHGLISLRCTSL-ASSC 266
++K PE P+VV D+ T P L S + H L+SLRC L SC
Sbjct: 111 LKKSPEGKPIVVDDEDDGMTCPICLDSWEMSGEHRLVSLRCGHLFGESC 159
>AY061121-1|AAL28669.1| 316|Drosophila melanogaster LD10431p
protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 241 GVQVSRLRAGKGKMRNRRRIQRKGPLIIFN 330
G+ + + G+ M+NR R Q +GPLII+N
Sbjct: 43 GIYMLVIFGGQHFMQNRPRFQLRGPLIIWN 72
>AF279258-1|AAG02080.1| 316|Drosophila melanogaster transmembrane
protein Noa protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 241 GVQVSRLRAGKGKMRNRRRIQRKGPLIIFN 330
G+ + + G+ M+NR R Q +GPLII+N
Sbjct: 43 GIYMLVIFGGQHFMQNRPRFQLRGPLIIWN 72
>AF265296-1|AAF75771.1| 316|Drosophila melanogaster putative
multipass transmembrane protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 241 GVQVSRLRAGKGKMRNRRRIQRKGPLIIFN 330
G+ + + G+ M+NR R Q +GPLII+N
Sbjct: 43 GIYMLVIFGGQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2796|AAF49415.1| 608|Drosophila melanogaster CG13025-PA
protein.
Length = 608
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 126 IEKIPE-LPLVVADKSRRSTRPNRLSSS*GASRHGLISLRCTSL-ASSC 266
++K PE P+VV D+ T P L S + H L+SLRC L SC
Sbjct: 111 LKKSPEGKPIVVDDEDDGMTCPICLDSWEMSGEHRLVSLRCGHLFGESC 159
>AE014296-2778|AAN11736.2| 316|Drosophila melanogaster CG3971-PB,
isoform B protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 241 GVQVSRLRAGKGKMRNRRRIQRKGPLIIFN 330
G+ + + G+ M+NR R Q +GPLII+N
Sbjct: 43 GIYMLVIFGGQHFMQNRPRFQLRGPLIIWN 72
>AE014296-2777|AAF49430.2| 316|Drosophila melanogaster CG3971-PA,
isoform A protein.
Length = 316
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 241 GVQVSRLRAGKGKMRNRRRIQRKGPLIIFN 330
G+ + + G+ M+NR R Q +GPLII+N
Sbjct: 43 GIYMLVIFGGQHFMQNRPRFQLRGPLIIWN 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,310,600
Number of Sequences: 53049
Number of extensions: 386094
Number of successful extensions: 1342
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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