Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10423
         (837 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D13964-1|BAA03067.2|  917|Drosophila melanogaster alpha-catenin ...    44   2e-04
AY051780-1|AAK93204.1|  917|Drosophila melanogaster LD30423p pro...    44   2e-04
AE014296-3768|AAF45466.1|  917|Drosophila melanogaster CG17947-P...    44   2e-04
AE014297-1521|AAF54813.1|  501|Drosophila melanogaster CG5245-PA...    30   4.5  

>D13964-1|BAA03067.2|  917|Drosophila melanogaster alpha-catenin
           protein.
          Length = 917

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -2

Query: 833 AKVRRGSQKKQPSPIHALAEFQSPPTA 753
           AKVR+GSQKK  +PIHAL+EFQSP  A
Sbjct: 890 AKVRKGSQKKVQNPIHALSEFQSPADA 916


>AY051780-1|AAK93204.1|  917|Drosophila melanogaster LD30423p
           protein.
          Length = 917

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -2

Query: 833 AKVRRGSQKKQPSPIHALAEFQSPPTA 753
           AKVR+GSQKK  +PIHAL+EFQSP  A
Sbjct: 890 AKVRKGSQKKVQNPIHALSEFQSPADA 916


>AE014296-3768|AAF45466.1|  917|Drosophila melanogaster CG17947-PA
           protein.
          Length = 917

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = -2

Query: 833 AKVRRGSQKKQPSPIHALAEFQSPPTA 753
           AKVR+GSQKK  +PIHAL+EFQSP  A
Sbjct: 890 AKVRKGSQKKVQNPIHALSEFQSPADA 916


>AE014297-1521|AAF54813.1|  501|Drosophila melanogaster CG5245-PA
           protein.
          Length = 501

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
 Frame = +2

Query: 299 LREREREHASRHLSRTFVTSQDPTEHLNVNFXDFNRNPLCMLCIS-----GPVHVESTVH 463
           L+  +R H   H S+TF  +    +HL+ +  +  R   C  C +       + V    H
Sbjct: 130 LKHEKRPHKCSHCSKTFTQNSSLKQHLHEHTGE--RPFKCTQCSTSFARKSHLQVHLRTH 187

Query: 464 SSARTIRCS-CQTSTINMSH 520
           S  R   C+ C+ +  N SH
Sbjct: 188 SEERPFECTHCEKAFKNNSH 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,830,029
Number of Sequences: 53049
Number of extensions: 835189
Number of successful extensions: 2433
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2429
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)