Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0250.Seq
         (797 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr...    30   4.2  
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA...    30   4.2  
AE013599-3553|AAF46964.2|  922|Drosophila melanogaster CG9899-PA...    29   7.4  

>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
           protein.
          Length = 1795

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
 Frame = +3

Query: 144 GGKIKENARKMSVNLCAQEG--EEPRDVVLHFDVRFHRD-----TSYRCPGRTAFGSEAE 302
           G  I +N  ++    CA+EG    P D  L++  R         T ++CPG  +F  E +
Sbjct: 207 GSYIPQNC-ELKFPECAEEGTFRSPTDCALYYTCRLQESGTYLQTRFKCPGSNSFDLERK 265

Query: 303 ITTP 314
           +  P
Sbjct: 266 LCRP 269


>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
           protein.
          Length = 1795

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
 Frame = +3

Query: 144 GGKIKENARKMSVNLCAQEG--EEPRDVVLHFDVRFHRD-----TSYRCPGRTAFGSEAE 302
           G  I +N  ++    CA+EG    P D  L++  R         T ++CPG  +F  E +
Sbjct: 207 GSYIPQNC-ELKFPECAEEGTFRSPTDCALYYTCRLQESGTYLQTRFKCPGSNSFDLERK 265

Query: 303 ITTP 314
           +  P
Sbjct: 266 LCRP 269


>AE013599-3553|AAF46964.2|  922|Drosophila melanogaster CG9899-PA
           protein.
          Length = 922

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 543 APSAPQSPRTATGGR*REKDCPKGQGRLANKVPPKK 650
           AP AP  P+ + G    +K+   G G+     PPKK
Sbjct: 853 APLAPDVPKKSAGNGRAKKNQENGDGKAKKSGPPKK 888


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,644,110
Number of Sequences: 53049
Number of extensions: 914131
Number of successful extensions: 3215
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3209
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3716337612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)