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Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0016
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82641-1|CAA57963.1|  643|Drosophila melanogaster alpha 1,2 mann...    30   2.7  
AE014298-1434|AAF46571.3|  643|Drosophila melanogaster CG32684-P...    30   2.7  

>X82641-1|CAA57963.1|  643|Drosophila melanogaster alpha 1,2
           mannosidase protein.
          Length = 643

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 420 NNVAFHQIIRLNYKNGSNVLLQCENSTN*IKKXNN*SRMVYL 545
           NN+    IIRLN K  S+ +   EN    +   NN  R VYL
Sbjct: 33  NNINLSNIIRLNEKVASDSVSNNENQIKELNYVNNHPRNVYL 74


>AE014298-1434|AAF46571.3|  643|Drosophila melanogaster CG32684-PB,
           isoform B protein.
          Length = 643

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 420 NNVAFHQIIRLNYKNGSNVLLQCENSTN*IKKXNN*SRMVYL 545
           NN+    IIRLN K  S+ +   EN    +   NN  R VYL
Sbjct: 33  NNINLSNIIRLNEKVASDSVSNNENQIKELNYVNNHPRNVYL 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,492,096
Number of Sequences: 53049
Number of extensions: 319140
Number of successful extensions: 578
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).