Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0006
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051621-1|AAK93045.1|  611|Drosophila melanogaster GH26702p pro...    29   4.6  
AE014296-942|AAF50789.1|  611|Drosophila melanogaster CG4669-PA ...    29   4.6  
AE013599-2559|AAF57791.1|  649|Drosophila melanogaster CG18635-P...    29   4.6  

>AY051621-1|AAK93045.1|  611|Drosophila melanogaster GH26702p
           protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 520 VLNLKRAINRFFESYKHGVICAKSYCVAVWK 612
           + NL+R +  FF+  K+GV    ++ + +WK
Sbjct: 195 IRNLRRILRAFFKKAKYGVFFTPNWYLLIWK 225


>AE014296-942|AAF50789.1|  611|Drosophila melanogaster CG4669-PA
           protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 520 VLNLKRAINRFFESYKHGVICAKSYCVAVWK 612
           + NL+R +  FF+  K+GV    ++ + +WK
Sbjct: 195 IRNLRRILRAFFKKAKYGVFFTPNWYLLIWK 225


>AE013599-2559|AAF57791.1|  649|Drosophila melanogaster CG18635-PA
           protein.
          Length = 649

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 305 IEPHIHWKPQLIDGILKYGD-RVHTMSLPRASAPPGLRPNEIID 433
           I+ ++   P+L+ G LK  D   HT+ +P++  P  L P +++D
Sbjct: 418 IKENVPHPPKLLIGRLKDEDPEEHTVLIPQSPKPSPLTPKDVVD 461


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,785,198
Number of Sequences: 53049
Number of extensions: 514137
Number of successful extensions: 1429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)