Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0165.Seq
         (853 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT006022-1|AAO74705.1|   91|Drosophila melanogaster GM02743p pro...    31   2.7  

>BT006022-1|AAO74705.1|   91|Drosophila melanogaster GM02743p
           protein.
          Length = 91

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = +3

Query: 81  YNNITIT*RRRKLN*I*FTSVHTVH*KCIIIHNKLLIKFHIIYLNRIIFKHL 236
           Y N   T +RRKL  +  T VH  H  C+  + +  I   +I+  R+IF  L
Sbjct: 2   YGNFCDTDQRRKLLALNATIVHRKHVSCVNQYTRRNIIKKLIFTKRVIFMRL 53


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,885,853
Number of Sequences: 53049
Number of extensions: 678220
Number of successful extensions: 1282
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)