Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0113
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81795-1|AAA28483.1| 1301|Drosophila melanogaster phosphotyrosin...    29   6.7  
M80539-1|AAA28485.1| 1231|Drosophila melanogaster receptor-linke...    29   6.7  
M80464-1|AAA28486.1| 1231|Drosophila melanogaster protein-tyrosi...    29   6.7  
AY061108-1|AAL28656.1|  708|Drosophila melanogaster LD09551p pro...    28   8.9  
AE014296-285|AAN11490.1|  708|Drosophila melanogaster CG12099-PB...    28   8.9  
AE014296-284|AAF47511.1|  708|Drosophila melanogaster CG12099-PA...    28   8.9  

>M81795-1|AAA28483.1| 1301|Drosophila melanogaster phosphotyrosine
            phosphatase protein.
          Length = 1301

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 130  HPP*DISSKVSSIVTTAAPPFKPKRITAS 216
            H P D+S ++SS V  AA P  P   +AS
Sbjct: 1150 HSPSDLSHQISSTVANAASPVTPATASAS 1178


>M80539-1|AAA28485.1| 1231|Drosophila melanogaster receptor-linked
            protein tyrosinephosphatase protein.
          Length = 1231

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 130  HPP*DISSKVSSIVTTAAPPFKPKRITAS 216
            H P D+S ++SS V  AA P  P   +AS
Sbjct: 1080 HSPSDLSHQISSTVANAASPVTPATASAS 1108


>M80464-1|AAA28486.1| 1231|Drosophila melanogaster protein-tyrosine
            phosphatase protein.
          Length = 1231

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 130  HPP*DISSKVSSIVTTAAPPFKPKRITAS 216
            H P D+S ++SS V  AA P  P   +AS
Sbjct: 1080 HSPSDLSHQISSTVANAASPVTPATASAS 1108


>AY061108-1|AAL28656.1|  708|Drosophila melanogaster LD09551p
           protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = -2

Query: 391 RVLRSQFLQINGCFTFQTETR-YCGASPDVIRPVKISII*KYN---TEDNDTPIIIHPPI 224
           R  + QFLQ N  F  ++  +     SPD +  +  S I + N   TE+   PI ++PP+
Sbjct: 163 RYNKEQFLQANFQFVIRSGAKAQVNGSPDAL--IDWSYIEQINIQTTEELQCPICLYPPV 220

Query: 223 SA 218
           +A
Sbjct: 221 AA 222


>AE014296-285|AAN11490.1|  708|Drosophila melanogaster CG12099-PB,
           isoform B protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = -2

Query: 391 RVLRSQFLQINGCFTFQTETR-YCGASPDVIRPVKISII*KYN---TEDNDTPIIIHPPI 224
           R  + QFLQ N  F  ++  +     SPD +  +  S I + N   TE+   PI ++PP+
Sbjct: 163 RYNKEQFLQANFQFVIRSGAKAQVNGSPDAL--IDWSYIEQINIQTTEELQCPICLYPPV 220

Query: 223 SA 218
           +A
Sbjct: 221 AA 222


>AE014296-284|AAF47511.1|  708|Drosophila melanogaster CG12099-PA,
           isoform A protein.
          Length = 708

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
 Frame = -2

Query: 391 RVLRSQFLQINGCFTFQTETR-YCGASPDVIRPVKISII*KYN---TEDNDTPIIIHPPI 224
           R  + QFLQ N  F  ++  +     SPD +  +  S I + N   TE+   PI ++PP+
Sbjct: 163 RYNKEQFLQANFQFVIRSGAKAQVNGSPDAL--IDWSYIEQINIQTTEELQCPICLYPPV 220

Query: 223 SA 218
           +A
Sbjct: 221 AA 222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,637,461
Number of Sequences: 53049
Number of extensions: 541537
Number of successful extensions: 1085
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)