Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0105
         (655 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021965-1|AAX94786.1| 1953|Drosophila melanogaster GH12955p pro...    28   9.6  
AE014134-2132|AAF53146.1| 1953|Drosophila melanogaster CG6734-PA...    28   9.6  

>BT021965-1|AAX94786.1| 1953|Drosophila melanogaster GH12955p
           protein.
          Length = 1953

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 295 INPVLFFSTVTKRFFTLANLCMIMFRVHRK*LLKPVAYVILLL 423
           + P+L  + +T  F +  + C  + ++HR+ L KPV  V+ LL
Sbjct: 772 LRPLLMGNGLTATFDSRLSACRTVAQLHRQELPKPVRRVVRLL 814


>AE014134-2132|AAF53146.1| 1953|Drosophila melanogaster CG6734-PA
           protein.
          Length = 1953

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 295 INPVLFFSTVTKRFFTLANLCMIMFRVHRK*LLKPVAYVILLL 423
           + P+L  + +T  F +  + C  + ++HR+ L KPV  V+ LL
Sbjct: 772 LRPLLMGNGLTATFDSRLSACRTVAQLHRQELPKPVRRVVRLL 814


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,073,152
Number of Sequences: 53049
Number of extensions: 504482
Number of successful extensions: 691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)