Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00055
(693 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 118 8e-27
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 118 8e-27
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 118 8e-27
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 118 8e-27
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 106 3e-23
BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p pro... 34 0.21
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro... 34 0.21
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P... 34 0.21
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 34 0.21
DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856 pro... 30 2.6
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 4.5
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 4.5
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 118 bits (284), Expect = 8e-27
Identities = 62/150 (41%), Positives = 83/150 (55%)
Frame = +3
Query: 243 GYWTAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 422
G AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 423 XXXXXXXXXXQARGHIIEKIPELPLVVAEKSRRSTRPNRLSSS*GASRHGLISLRCTSLS 602
Q++GH+I+ + E PLVV+++ ++ + + + +
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 603 VFVLVRVKCATVRRIQRKGPLIIFNKDQGL 692
F R RRI R+GPL++++KD+GL
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGL 220
Score = 102 bits (244), Expect = 5e-22
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +1
Query: 34 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 213
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 214 AGHQTSAESWGTGR 255
AGHQTSAESWGTGR
Sbjct: 61 AGHQTSAESWGTGR 74
Score = 72.1 bits (169), Expect = 6e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +2
Query: 503 SRKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 637
S +VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+R
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDR 202
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 118 bits (284), Expect = 8e-27
Identities = 62/150 (41%), Positives = 83/150 (55%)
Frame = +3
Query: 243 GYWTAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 422
G AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 423 XXXXXXXXXXQARGHIIEKIPELPLVVAEKSRRSTRPNRLSSS*GASRHGLISLRCTSLS 602
Q++GH+I+ + E PLVV+++ ++ + + + +
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 603 VFVLVRVKCATVRRIQRKGPLIIFNKDQGL 692
F R RRI R+GPL++++KD+GL
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGL 220
Score = 102 bits (244), Expect = 5e-22
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +1
Query: 34 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 213
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 214 AGHQTSAESWGTGR 255
AGHQTSAESWGTGR
Sbjct: 61 AGHQTSAESWGTGR 74
Score = 72.1 bits (169), Expect = 6e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +2
Query: 503 SRKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 637
S +VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+R
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDR 202
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 118 bits (284), Expect = 8e-27
Identities = 62/150 (41%), Positives = 83/150 (55%)
Frame = +3
Query: 243 GYWTAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 422
G AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 423 XXXXXXXXXXQARGHIIEKIPELPLVVAEKSRRSTRPNRLSSS*GASRHGLISLRCTSLS 602
Q++GH+I+ + E PLVV+++ ++ + + + +
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 603 VFVLVRVKCATVRRIQRKGPLIIFNKDQGL 692
F R RRI R+GPL++++KD+GL
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGL 220
Score = 102 bits (244), Expect = 5e-22
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +1
Query: 34 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 213
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 214 AGHQTSAESWGTGR 255
AGHQTSAESWGTGR
Sbjct: 61 AGHQTSAESWGTGR 74
Score = 72.1 bits (169), Expect = 6e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +2
Query: 503 SRKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 637
S +VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+R
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDR 202
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 118 bits (284), Expect = 8e-27
Identities = 62/150 (41%), Positives = 83/150 (55%)
Frame = +3
Query: 243 GYWTAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 422
G AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 71 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSA 130
Query: 423 XXXXXXXXXXQARGHIIEKIPELPLVVAEKSRRSTRPNRLSSS*GASRHGLISLRCTSLS 602
Q++GH+I+ + E PLVV+++ ++ + + + +
Sbjct: 131 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQ 190
Query: 603 VFVLVRVKCATVRRIQRKGPLIIFNKDQGL 692
F R RRI R+GPL++++KD+GL
Sbjct: 191 RFRAGRGTMRDRRRIARRGPLVVYDKDEGL 220
Score = 102 bits (244), Expect = 5e-22
Identities = 49/74 (66%), Positives = 58/74 (78%)
Frame = +1
Query: 34 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 213
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 214 AGHQTSAESWGTGR 255
AGHQTSAESWGTGR
Sbjct: 61 AGHQTSAESWGTGR 74
Score = 72.1 bits (169), Expect = 6e-13
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +2
Query: 503 SRKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRNR 637
S +VQ++ KTKQAVIFLRRLK W+DI KVYKSQR RAG+G MR+R
Sbjct: 158 SDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDR 202
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 106 bits (254), Expect = 3e-23
Identities = 49/93 (52%), Positives = 60/93 (64%)
Frame = +3
Query: 243 GYWTAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXX 422
G AVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 9 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQRRYALVSA 68
Query: 423 XXXXXXXXXXQARGHIIEKIPELPLVVAEKSRR 521
Q++GH+I+ + E PLVV+++ ++
Sbjct: 69 IAASGVPALVQSKGHVIDGVSEFPLVVSDEVQK 101
Score = 44.8 bits (101), Expect = 1e-04
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2
Query: 503 SRKVQEINKTKQAVIFLRRLKAWSDILK 586
S +VQ++ KTKQAVIFLRRLK W+DI K
Sbjct: 96 SDEVQKVQKTKQAVIFLRRLKIWADIQK 123
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 220 HQTSAESWGTGR 255
HQTSAESWGTGR
Sbjct: 1 HQTSAESWGTGR 12
>BT023938-1|ABB36442.1| 1103|Drosophila melanogaster RE04201p protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 351 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQPSSTP*FSTGLVTSLLAHAVGLPRVL 178
G T HH + H + HH H G S++ + ++S LA A GL R++
Sbjct: 1004 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1061
>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p protein.
Length = 1413
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 351 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQPSSTP*FSTGLVTSLLAHAVGLPRVL 178
G T HH + H + HH H G S++ + ++S LA A GL R++
Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371
>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
isoform A protein.
Length = 1413
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 351 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQPSSTP*FSTGLVTSLLAHAVGLPRVL 178
G T HH + H + HH H G S++ + ++S LA A GL R++
Sbjct: 1314 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1371
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 33.9 bits (74), Expect = 0.21
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = -1
Query: 351 GRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQPSSTP*FSTGLVTSLLAHAVGLPRVL 178
G T HH + H + HH H G S++ + ++S LA A GL R++
Sbjct: 1601 GATDSHHQHQHHMHHSHHMHHAHHPHTGMGGSSSNSSSSTAAAISSSLAQAGGLRRIV 1658
>DQ066624-1|AAY83339.1| 265|Drosophila melanogaster HDC10856
protein.
Length = 265
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 506 GYNQGKLGNLFNNVSSSLNERWDAGSSNGCRQGR 405
GYN+G+ GN +N +++ N + G G QGR
Sbjct: 200 GYNRGRNGNNYNRGNNNSNNYNNRGGRRGRNQGR 233
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 39 SIGSPTFSVGVLREE*DGAGCSQAPPVRVQG--AHPSGPG 152
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 39 SIGSPTFSVGVLREE*DGAGCSQAPPVRVQG--AHPSGPG 152
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,300,559
Number of Sequences: 53049
Number of extensions: 687315
Number of successful extensions: 3533
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3488
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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