Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b08r
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    31   1.2  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.8  

>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
            protein.
          Length = 9196

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 60   PATHTDRQTDRQTGAPKPVTEPVCLPNTRLRDTT 161
            P  ++D +TD +   PKP+ +P+C P + +   T
Sbjct: 4003 PKEYSDDETDDEIEIPKPLDKPICQPTSLVTGAT 4036


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
 Frame = +3

Query: 78    RQTDRQTGAPKPVTEPVCLPNTRLRDTTRHIICSTIISVHALRPAC-TQCNSDMWDF*IV 254
             R+  R     +P     C P ++ R+   H +CS + +     PAC  +C+        V
Sbjct: 10692 REIPRLPAPVEPCRPSPCGPYSQCREVNGHAVCSCVTNYIGTPPACRPECS--------V 10743

Query: 255   MTQCASYR*YREGACV---CAHGC--TAGLSTFCFVLFTRHS 365
              ++CA  R     ACV   CA  C  T G    C V  T H+
Sbjct: 10744 SSECAQDR-----ACVNQRCADPCPGTCGNEAICKV--TNHN 10778


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,320,069
Number of Sequences: 53049
Number of extensions: 873171
Number of successful extensions: 2255
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2255
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)