Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b04f
(615 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016004-1|AAV36889.1| 113|Drosophila melanogaster RE39106p pro... 152 4e-37
AE014297-2204|AAF55312.1| 113|Drosophila melanogaster CG10406-P... 152 4e-37
AY061185-1|AAL28733.1| 274|Drosophila melanogaster LD15002p pro... 29 3.8
AF021259-1|AAB71892.1| 274|Drosophila melanogaster Pur-alpha pr... 29 3.8
AE014135-94|AAN06499.1| 260|Drosophila melanogaster CG1507-PD, ... 29 3.8
AE014135-93|AAN06498.1| 274|Drosophila melanogaster CG1507-PC, ... 29 3.8
AE014135-92|AAN06497.1| 274|Drosophila melanogaster CG1507-PA, ... 29 3.8
AE014135-91|AAF59337.2| 275|Drosophila melanogaster CG1507-PB, ... 29 3.8
U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein. 28 8.7
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 28 8.7
AE014298-914|AAF46176.1| 438|Drosophila melanogaster CG14443-PA... 28 8.7
>BT016004-1|AAV36889.1| 113|Drosophila melanogaster RE39106p
protein.
Length = 113
Score = 152 bits (368), Expect = 4e-37
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 67 KYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRH 246
KY +LI T YARRM LSNRIFGEVA TN KSMKVV++FS P+H + +I++YPRH
Sbjct: 4 KYTELIKVGTQYARRMNYLSNRIFGEVARTTNEKSMKVVRMFSEEPIHKRDYVINWYPRH 63
Query: 247 METHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 354
+ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK
Sbjct: 64 VETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99
>AE014297-2204|AAF55312.1| 113|Drosophila melanogaster CG10406-PA
protein.
Length = 113
Score = 152 bits (368), Expect = 4e-37
Identities = 69/96 (71%), Positives = 79/96 (82%)
Frame = +1
Query: 67 KYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRH 246
KY +LI T YARRM LSNRIFGEVA TN KSMKVV++FS P+H + +I++YPRH
Sbjct: 4 KYTELIKVGTQYARRMNYLSNRIFGEVARTTNEKSMKVVRMFSEEPIHKRDYVINWYPRH 63
Query: 247 METHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 354
+ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK
Sbjct: 64 VETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99
>AY061185-1|AAL28733.1| 274|Drosophila melanogaster LD15002p
protein.
Length = 274
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177
Y +MK+ S+ I E+ LPT+S S+K
Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274
>AF021259-1|AAB71892.1| 274|Drosophila melanogaster Pur-alpha
protein.
Length = 274
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177
Y +MK+ S+ I E+ LPT+S S+K
Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274
>AE014135-94|AAN06499.1| 260|Drosophila melanogaster CG1507-PD,
isoform D protein.
Length = 260
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177
Y +MK+ S+ I E+ LPT+S S+K
Sbjct: 235 YCEKMKKSSDSITAEINLPTSSNSLK 260
>AE014135-93|AAN06498.1| 274|Drosophila melanogaster CG1507-PC,
isoform C protein.
Length = 274
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177
Y +MK+ S+ I E+ LPT+S S+K
Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274
>AE014135-92|AAN06497.1| 274|Drosophila melanogaster CG1507-PA,
isoform A protein.
Length = 274
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177
Y +MK+ S+ I E+ LPT+S S+K
Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274
>AE014135-91|AAF59337.2| 275|Drosophila melanogaster CG1507-PB,
isoform B protein.
Length = 275
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177
Y +MK+ S+ I E+ LPT+S S+K
Sbjct: 250 YCEKMKKSSDSITAEINLPTSSNSLK 275
>U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.
Length = 1231
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 261 FMRLHVSRIIVYNFLICVQRSSREDFDNLHGLGVGR*GN 145
+ ++H+ +II+ F ++ E FD H + VGR G+
Sbjct: 29 YNKMHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGS 67
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 61 YTKYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMK 177
Y+KYA LI S+ KR +IF E+ P+ K+ K
Sbjct: 842 YSKYAALIEVSSRDWLEAKRALLKIFNEMGKPSEIKADK 880
>AE014298-914|AAF46176.1| 438|Drosophila melanogaster CG14443-PA
protein.
Length = 438
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/25 (40%), Positives = 20/25 (80%)
Frame = +1
Query: 70 YAQLINTSTTYARRMKRLSNRIFGE 144
+AQLI +ST+++ +KR++N+ G+
Sbjct: 208 HAQLIVSSTSWSSNLKRMANKFLGQ 232
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,203,324
Number of Sequences: 53049
Number of extensions: 498569
Number of successful extensions: 1217
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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