Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10a19r
(496 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA... 33 0.21
AF023478-1|AAB87873.1| 850|Drosophila melanogaster GTPase activ... 31 0.65
AE014134-1295|AAF52526.1| 850|Drosophila melanogaster CG33529-P... 31 0.65
BT003302-1|AAO25062.1| 653|Drosophila melanogaster GH11071p pro... 31 1.1
AE014134-784|AAN10338.1| 653|Drosophila melanogaster CG2950-PC,... 31 1.1
AE014134-783|AAF50972.1| 653|Drosophila melanogaster CG2950-PB,... 31 1.1
AE014134-782|AAF50973.1| 653|Drosophila melanogaster CG2950-PA,... 31 1.1
BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p pro... 30 1.5
AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-P... 30 1.5
>AE014296-856|AAN11603.1| 440|Drosophila melanogaster CG32241-PA
protein.
Length = 440
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -1
Query: 466 KMKFLVAFALIAVASARVFEPISVGPALVDT---YEPIDTEPAYVDIP 332
K KFL+AFAL+AVASA V S L + Y P + P +D+P
Sbjct: 25 KQKFLIAFALVAVASADVSHLFSNSNNLQEDGYHYAP-PSAPVVIDVP 71
>AF023478-1|AAB87873.1| 850|Drosophila melanogaster GTPase
activating protein for Rap1 protein.
Length = 850
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 131 RDNGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSS 310
R +G++ + G++N S + ++SGN + H + H N +N+NR H S
Sbjct: 13 RISGSIGNSSGNSNN-NHHHSSNSNSSSGNNNAHQQQHNNNHINNNMNNNNNRENHHRGS 71
Query: 311 H 313
+
Sbjct: 72 N 72
>AE014134-1295|AAF52526.1| 850|Drosophila melanogaster CG33529-PA,
isoform A protein.
Length = 850
Score = 31.5 bits (68), Expect = 0.65
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 131 RDNGALFSLFGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSS 310
R +G++ + G++N S + ++SGN + H + H N +N+NR H S
Sbjct: 13 RISGSIGNSSGNSNN-NHHHSSNSNSSSGNNNAHQQQHNNNHINNNMNNNNNRENHHRGS 71
Query: 311 H 313
+
Sbjct: 72 N 72
>BT003302-1|AAO25062.1| 653|Drosophila melanogaster GH11071p
protein.
Length = 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 FSLFGDNNGVGLD-FSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYT 319
F L G ++G+GL+ S N +G D DE+ GG+S SN N SH++
Sbjct: 491 FWLPGTDSGIGLNCVVSSSANNNGEGD--DEVFAEPSNGGSSTSNQNGLARSRRSHFS 546
>AE014134-784|AAN10338.1| 653|Drosophila melanogaster CG2950-PC,
isoform C protein.
Length = 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 FSLFGDNNGVGLD-FSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYT 319
F L G ++G+GL+ S N +G D DE+ GG+S SN N SH++
Sbjct: 491 FWLPGTDSGIGLNCVVSSSANNNGEGD--DEVFAEPSNGGSSTSNQNGLARSRRSHFS 546
>AE014134-783|AAF50972.1| 653|Drosophila melanogaster CG2950-PB,
isoform B protein.
Length = 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 FSLFGDNNGVGLD-FSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYT 319
F L G ++G+GL+ S N +G D DE+ GG+S SN N SH++
Sbjct: 491 FWLPGTDSGIGLNCVVSSSANNNGEGD--DEVFAEPSNGGSSTSNQNGLARSRRSHFS 546
>AE014134-782|AAF50973.1| 653|Drosophila melanogaster CG2950-PA,
isoform A protein.
Length = 653
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 149 FSLFGDNNGVGLD-FSGSIRNTSGNVDVHDELHKRRGTGGNSRSNDNRSGLHGSSHYT 319
F L G ++G+GL+ S N +G D DE+ GG+S SN N SH++
Sbjct: 491 FWLPGTDSGIGLNCVVSSSANNNGEGD--DEVFAEPSNGGSSTSNQNGLARSRRSHFS 546
>BT010056-1|AAQ22525.1| 1417|Drosophila melanogaster LD18032p protein.
Length = 1417
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 158 FGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRG 256
+G NN + + + I NT+G V + LH+R+G
Sbjct: 1104 YGSNNNIAANMA--IANTNGGASVRNSLHRRKG 1134
>AE014134-3263|AAF53910.3| 1621|Drosophila melanogaster CG31678-PA
protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 158 FGDNNGVGLDFSGSIRNTSGNVDVHDELHKRRG 256
+G NN + + + I NT+G V + LH+R+G
Sbjct: 1308 YGSNNNIAANMA--IANTNGGASVRNSLHRRKG 1338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,587,579
Number of Sequences: 53049
Number of extensions: 180116
Number of successful extensions: 901
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1742533632
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -