SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0006
         (852 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM773627-1|CAO79269.1|  355|Drosophila melanogaster desaturase p...    31   2.0  
BT023260-1|AAY55676.1|  339|Drosophila melanogaster IP02693p pro...    29   6.1  
AJ271414-1|CAB69053.1|  355|Drosophila melanogaster fatty acid d...    29   6.1  
AE014296-1871|AAF50118.1|  355|Drosophila melanogaster CG7923-PA...    29   6.1  

>AM773627-1|CAO79269.1|  355|Drosophila melanogaster desaturase
           protein.
          Length = 355

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = -1

Query: 489 TKRVNTPLFLVFFFLNTIA 433
           T +VNTPL L+F FLNT+A
Sbjct: 98  TFKVNTPLKLIFLFLNTLA 116


>BT023260-1|AAY55676.1|  339|Drosophila melanogaster IP02693p
           protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 489 TKRVNTPLFLVFFFLNTIA 433
           T + NTPL L+F FLNT+A
Sbjct: 99  TFKANTPLKLIFLFLNTLA 117


>AJ271414-1|CAB69053.1|  355|Drosophila melanogaster fatty acid
           desaturase protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 489 TKRVNTPLFLVFFFLNTIA 433
           T + NTPL L+F FLNT+A
Sbjct: 98  TFKANTPLKLIFLFLNTLA 116


>AE014296-1871|AAF50118.1|  355|Drosophila melanogaster CG7923-PA
           protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 489 TKRVNTPLFLVFFFLNTIA 433
           T + NTPL L+F FLNT+A
Sbjct: 98  TFKANTPLKLIFLFLNTLA 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,017,877
Number of Sequences: 53049
Number of extensions: 592564
Number of successful extensions: 1038
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).