SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0095
         (319 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p pro...    27   3.9  
AE013599-750|AAF59016.1| 1428|Drosophila melanogaster CG13745-PA...    27   3.9  
AF145692-1|AAD38667.1|  573|Drosophila melanogaster BcDNA.LD2989...    26   9.1  
AE013599-1397|AAF58578.1|  573|Drosophila melanogaster CG8378-PA...    26   9.1  

>BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p
           protein.
          Length = 1431

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 242 MITLLAKCIYKRFDVMCSIY*N 177
           +I +L  C+ ++FD+ CS+Y N
Sbjct: 586 IIGMLRNCLQQQFDIRCSLYEN 607


>AE013599-750|AAF59016.1| 1428|Drosophila melanogaster CG13745-PA
           protein.
          Length = 1428

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 242 MITLLAKCIYKRFDVMCSIY*N 177
           +I +L  C+ ++FD+ CS+Y N
Sbjct: 570 IIGMLRNCLQQQFDIRCSLYEN 591


>AF145692-1|AAD38667.1|  573|Drosophila melanogaster BcDNA.LD29892
           protein.
          Length = 573

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -2

Query: 267 TKLTLQECNDHFISKMHL*EI*CNVFNLLE*EYALNDKVHCH*KRKSLVQINIYCFIEKV 88
           T    +EC    +   H  E  C + + L     + +K+HC   R +LV +NI+  IE++
Sbjct: 250 TMFCSEECKSIAMQTYHRYE--CPIIDFLN---RMFNKIHCIALRTTLVALNIFPSIEEL 304

Query: 87  L 85
           +
Sbjct: 305 I 305


>AE013599-1397|AAF58578.1|  573|Drosophila melanogaster CG8378-PA
           protein.
          Length = 573

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = -2

Query: 267 TKLTLQECNDHFISKMHL*EI*CNVFNLLE*EYALNDKVHCH*KRKSLVQINIYCFIEKV 88
           T    +EC    +   H  E  C + + L     + +K+HC   R +LV +NI+  IE++
Sbjct: 250 TMFCSEECKSIAMQTYHRYE--CPIIDFLN---RMFNKIHCIALRTTLVALNIFPSIEEL 304

Query: 87  L 85
           +
Sbjct: 305 I 305


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,515,823
Number of Sequences: 53049
Number of extensions: 156387
Number of successful extensions: 229
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -