Silkworm BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0022
         (357 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p pro...    55   3e-08
AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-P...    55   3e-08
AE013599-2072|AAM70976.1|  733|Drosophila melanogaster CG30471-P...    29   1.7  
AY069076-1|AAL39221.1|  997|Drosophila melanogaster GH09323p pro...    27   9.3  
AY058416-1|AAL13645.1|  754|Drosophila melanogaster GH19286p pro...    27   9.3  
AF461101-1|AAL66369.1|  997|Drosophila melanogaster dystroglycan...    27   9.3  
AE014296-870|AAN11608.1|  754|Drosophila melanogaster CG11353-PB...    27   9.3  
AE014296-869|AAF47917.1|  754|Drosophila melanogaster CG11353-PA...    27   9.3  
AE013599-2170|AAF58068.2|  997|Drosophila melanogaster CG18250-P...    27   9.3  

>BT003539-1|AAO39543.1|  373|Drosophila melanogaster RE05288p
           protein.
          Length = 373

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = +2

Query: 179 TGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 313
           TGSR   +++  +C  WY++SS++NV+GK+ L E PFP+T+T VQ
Sbjct: 6   TGSRHIAVVL-LMCLFWYVISSSNNVIGKMVLNEFPFPMTVTLVQ 49


>AE014298-3170|AAF50956.1|  373|Drosophila melanogaster CG14621-PA
           protein.
          Length = 373

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = +2

Query: 179 TGSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 313
           TGSR   +++  +C  WY++SS++NV+GK+ L E PFP+T+T VQ
Sbjct: 6   TGSRHIAVVL-LMCLFWYVISSSNNVIGKMVLNEFPFPMTVTLVQ 49


>AE013599-2072|AAM70976.1|  733|Drosophila melanogaster CG30471-PA
           protein.
          Length = 733

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 266 VCPRHYWLNLTY-TTLRTGSQLLVSRAWSRLYPLRFFFYQKVL 141
           +CP+H+W NL +   L    ++  + +WS    ++FF    ++
Sbjct: 462 LCPQHWWRNLLFIQNLFDHREMCANWSWSLACDMQFFLLANIV 504


>AY069076-1|AAL39221.1|  997|Drosophila melanogaster GH09323p
           protein.
          Length = 997

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 333 SEAAAHSCTAVIVSGNGSSVNASLPTTLLAELNIYHAAHR 214
           S AAA + TA   +   ++ NAS  T   +E +I    HR
Sbjct: 281 STAAAAAATAAAATATATTANASATTAGESEFHIESTTHR 320


>AY058416-1|AAL13645.1|  754|Drosophila melanogaster GH19286p
           protein.
          Length = 754

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 266 VCPRHYWLNLTY-TTLRTGSQLLVSRAWSRLYPLRFFFYQKVL 141
           +C RH+W NL +   L     +  + +WS    ++FF     L
Sbjct: 482 MCTRHWWRNLLFIQNLFDHRDMCANWSWSLACEMQFFILANAL 524


>AF461101-1|AAL66369.1|  997|Drosophila melanogaster dystroglycan
           type II protein.
          Length = 997

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 333 SEAAAHSCTAVIVSGNGSSVNASLPTTLLAELNIYHAAHR 214
           S AAA + TA   +   ++ NAS  T   +E +I    HR
Sbjct: 281 STAAAAAATAAAATATATTANASATTAGESEFHIESTTHR 320


>AE014296-870|AAN11608.1|  754|Drosophila melanogaster CG11353-PB,
           isoform B protein.
          Length = 754

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 266 VCPRHYWLNLTY-TTLRTGSQLLVSRAWSRLYPLRFFFYQKVL 141
           +C RH+W NL +   L     +  + +WS    ++FF     L
Sbjct: 482 MCTRHWWRNLLFIQNLFDHRDMCANWSWSLACEMQFFILANAL 524


>AE014296-869|AAF47917.1|  754|Drosophila melanogaster CG11353-PA,
           isoform A protein.
          Length = 754

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 266 VCPRHYWLNLTY-TTLRTGSQLLVSRAWSRLYPLRFFFYQKVL 141
           +C RH+W NL +   L     +  + +WS    ++FF     L
Sbjct: 482 MCTRHWWRNLLFIQNLFDHRDMCANWSWSLACEMQFFILANAL 524


>AE013599-2170|AAF58068.2|  997|Drosophila melanogaster CG18250-PA,
           isoform A protein.
          Length = 997

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 333 SEAAAHSCTAVIVSGNGSSVNASLPTTLLAELNIYHAAHR 214
           S AAA + TA   +   ++ NAS  T   +E +I    HR
Sbjct: 281 STAAAAAATAAAATATATTANASATTAGESEFHIESTTHR 320


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,110
Number of Sequences: 53049
Number of extensions: 278334
Number of successful extensions: 761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)