Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120051.Seq
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051861-1|AAK93285.1|  575|Drosophila melanogaster LD35753p pro...    29   5.4  
AL109630-15|CAB51681.1|  575|Drosophila melanogaster EG:BACR7A4....    29   5.4  
AF081540-1|AAD09003.1|  575|Drosophila melanogaster CDC45L protein.    29   5.4  
AE014298-142|AAF45579.1|  575|Drosophila melanogaster CG3658-PA ...    29   5.4  

>AY051861-1|AAK93285.1|  575|Drosophila melanogaster LD35753p
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = +3

Query: 495 YFTSIEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNH 650
           +F+ +E +   + IAD +YG TF ++ G+   +     ++ L+  +  +  H
Sbjct: 353 FFSMVERLAEKYDIADIVYG-TFTLSYGYRSRYAAADYVYALLAIMESVKKH 403


>AL109630-15|CAB51681.1|  575|Drosophila melanogaster
           EG:BACR7A4.11,FBgn0026143;CDC45L protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = +3

Query: 495 YFTSIEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNH 650
           +F+ +E +   + IAD +YG TF ++ G+   +     ++ L+  +  +  H
Sbjct: 353 FFSMVERLAEKYDIADIVYG-TFTLSYGYRSRYAAADYVYALLAIMESVKKH 403


>AF081540-1|AAD09003.1|  575|Drosophila melanogaster CDC45L protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = +3

Query: 495 YFTSIEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNH 650
           +F+ +E +   + IAD +YG TF ++ G+   +     ++ L+  +  +  H
Sbjct: 353 FFSMVERLAEKYDIADIVYG-TFTLSYGYRSRYAAADYVYALLAIMESVKKH 403


>AE014298-142|AAF45579.1|  575|Drosophila melanogaster CG3658-PA
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/52 (23%), Positives = 27/52 (51%)
 Frame = +3

Query: 495 YFTSIEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNH 650
           +F+ +E +   + IAD +YG TF ++ G+   +     ++ L+  +  +  H
Sbjct: 353 FFSMVERLAEKYDIADIVYG-TFTLSYGYRSRYAAADYVYALLAIMESVKKH 403


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,148,555
Number of Sequences: 53049
Number of extensions: 325163
Number of successful extensions: 524
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)