Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30061
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83234-1|CAB70169.1|  313|Caenorhabditis elegans Hypothetical pr...    97   9e-21
Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical pr...    34   0.13 
AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine re...    31   0.92 
Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical pr...    29   2.8  
M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiport...    29   2.8  
AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H...    29   2.8  
AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H...    29   2.8  
Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AL032626-1|CAA21538.1|  183|Caenorhabditis elegans Hypothetical ...    28   8.6  

>Z83234-1|CAB70169.1|  313|Caenorhabditis elegans Hypothetical
           protein K09E4.3 protein.
          Length = 313

 Score = 97.5 bits (232), Expect = 9e-21
 Identities = 46/83 (55%), Positives = 62/83 (74%)
 Frame = +2

Query: 509 ELRQALQLSDLERRGGVSPHISPFTRPTDIGGLLNAAGFTLQTVDIDKMTIWYPSAFELM 688
           ELR +LQL++LER GGVS HISPF +  DIGGLL++AGF + T+D D++ + YP+ F LM
Sbjct: 156 ELRCSLQLAELERIGGVSSHISPFVKTQDIGGLLSSAGFDMITLDSDEIQVGYPNMFALM 215

Query: 689 RDLRLAGESNAAHNRSGHLPRDV 757
            DL+L GES+  H R+  + RDV
Sbjct: 216 YDLQLMGESHCTHRRNPTIRRDV 238



 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 23/65 (35%), Positives = 42/65 (64%)
 Frame = +1

Query: 58  IFDRKTKMIQRERAACNDEYHLSEYVKEEIGWRTADKIFDIKRTFKNAVELGASRGYVSR 237
           +FDR+ K  QR+ A    ++  ++Y+KEEIGWR ADK+FD+ +     +++G   G+++ 
Sbjct: 2   VFDRQMKRGQRDWAVRQPDFKAAQYLKEEIGWRVADKVFDLTKFNPLVLDIGCGVGHIAP 61

Query: 238 HFLPD 252
           H + +
Sbjct: 62  HLIKE 66



 Score = 40.3 bits (90), Expect = 0.002
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
 Frame = +3

Query: 330 EKMIMDEENFE-LPDDSVDLLVSSLTFHWVNDLPGLFDRIMKCLKPDGVLLACTFGGDTL 506
           E+  +DEE  +   ++  DLL++S++ HW+N LP    +    +KPD   +      DTL
Sbjct: 95  ERRTVDEETLDGFHENQFDLLLTSMSAHWINHLPQWMRKCHDIVKPDCPFIGSMLAEDTL 154


>Z81528-6|CAB04285.1|  633|Caenorhabditis elegans Hypothetical
           protein F35E2.7 protein.
          Length = 633

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -3

Query: 185 LLMSNILSAVRQPISSLTYSDKWYSSLQAA-LSLCIILVFLSNIFIVRYIEL 33
           LL+  ++S++   +      +KWY +L +  LSL +I++F  NI +++Y +L
Sbjct: 342 LLIVALISSILLAVLVFETFEKWYLTLTSTNLSLLVIILFFLNILLIKYDKL 393


>AC024881-3|AAK71413.1|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein6 protein.
          Length = 306

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 200 AFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELAVFC 21
           A + + L+ +IL  V+ P    T+S +WY  L   L +   ++F    FI    E+ +FC
Sbjct: 96  AMIMLFLVVDILVIVKFPRFYHTFSTEWYIILALILPVIFGIIFFIWGFIETDDEIVIFC 155


>Z73898-3|CAC42390.2|  606|Caenorhabditis elegans Hypothetical
           protein ZK822.3c protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 HYHLFILNALTNYCLIEMSSGCVTQCHLLH 255
           H+ L+ + A   +CLI  + G V QC++L+
Sbjct: 288 HFDLYFICATLFFCLIYRAIGIVVQCYILN 317


>Z73898-2|CAC42388.1|  667|Caenorhabditis elegans Hypothetical
           protein ZK822.3b protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 HYHLFILNALTNYCLIEMSSGCVTQCHLLH 255
           H+ L+ + A   +CLI  + G V QC++L+
Sbjct: 348 HFDLYFICATLFFCLIYRAIGIVVQCYILN 377


>Z73898-1|CAC42389.1|  647|Caenorhabditis elegans Hypothetical
           protein ZK822.3a protein.
          Length = 647

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 HYHLFILNALTNYCLIEMSSGCVTQCHLLH 255
           H+ L+ + A   +CLI  + G V QC++L+
Sbjct: 328 HFDLYFICATLFFCLIYRAIGIVVQCYILN 357


>M23064-1|AAA27892.1|  609|Caenorhabditis elegans Na+/H+ antiporter
           protein.
          Length = 609

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 HYHLFILNALTNYCLIEMSSGCVTQCHLLH 255
           H+ L+ + A   +CLI  + G V QC++L+
Sbjct: 291 HFDLYFICATLFFCLIYRAIGIVVQCYILN 320


>AF497835-1|AAM18113.1|  647|Caenorhabditis elegans putative Na-H
           exchanger isoform 9b protein.
          Length = 647

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 HYHLFILNALTNYCLIEMSSGCVTQCHLLH 255
           H+ L+ + A   +CLI  + G V QC++L+
Sbjct: 328 HFDLYFICATLFFCLIYRAIGIVVQCYILN 357


>AF497834-1|AAM18112.1|  667|Caenorhabditis elegans putative Na-H
           exchanger isoform 9a protein.
          Length = 667

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -3

Query: 344 HYHLFILNALTNYCLIEMSSGCVTQCHLLH 255
           H+ L+ + A   +CLI  + G V QC++L+
Sbjct: 348 HFDLYFICATLFFCLIYRAIGIVVQCYILN 377


>Z81146-7|CAB03523.2|  517|Caenorhabditis elegans Hypothetical
           protein K10D11.4 protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 210 GSLSWICITAFPAGQVEKVTLCD-TSRTHLDKAIVGEGVQYEKMIMDEENFELPDDSVDL 386
           G +  + I  F +       LC    R+ L+K +V    + +K +   E FE P++   +
Sbjct: 22  GKIKAVAIDWFDSNHFAGRQLCSLVGRSCLEKQVV----EPKKPVNSSEEFEFPNNKSVV 77

Query: 387 LVSSLTFHWVNDLPGLF 437
            +++ +  WV  +PG F
Sbjct: 78  FLANKSCSWVILVPGNF 94


>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
           protein D2085.1 protein.
          Length = 2198

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 444 IMKCLKPDGVLLACTFGGDTLMSC 515
           ++K  +P G+L  CTFGG T ++C
Sbjct: 460 VIKKERPTGIL--CTFGGQTALNC 481


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -3

Query: 209 SSTAFLNVLLMSNILSAVRQPISSLTYSDKWYSSLQAALSLCIILVFLSNIFIVRYIELA 30
           S TA L  + + N    +R+P+S       +  +  A  SLC I  +L NIF   +   A
Sbjct: 27  SITALLVNVYLLNCARYLRRPVSVNLRLCVFLLACDALCSLCYIFTYLINIFFSHFSNCA 86


>AL032626-1|CAA21538.1|  183|Caenorhabditis elegans Hypothetical
           protein Y37D8A.1 protein.
          Length = 183

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 225 ICITAFPAGQ--VEKVTLCDTSRTHLDKAIVGEGV 323
           +C  AFP  Q    K  LC   R  +DK +VG+GV
Sbjct: 147 LCDLAFPDPQDRPSKWWLCFARRRFMDKGLVGQGV 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,593,849
Number of Sequences: 27780
Number of extensions: 444378
Number of successful extensions: 1409
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)