Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30057
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical pr...    75   5e-14
Z81549-10|CAI79203.1|  128|Caenorhabditis elegans Hypothetical p...    29   3.5  
AL132862-23|CAB60559.1|  540|Caenorhabditis elegans Hypothetical...    29   3.5  
U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase prote...    28   8.1  
AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase pro...    28   8.1  
AF130443-1|AAD28468.1|  956|Caenorhabditis elegans EAG K+ channe...    28   8.1  
AF036695-1|AAB88348.2|  956|Caenorhabditis elegans Egg laying de...    28   8.1  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    28   8.1  

>U10402-3|AAK95874.1|  734|Caenorhabditis elegans Hypothetical
           protein C34E10.5 protein.
          Length = 734

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 36/55 (65%), Positives = 39/55 (70%)
 Frame = +3

Query: 3   IIVSELLGSWGDNELSPECLDGASNLLKPGGISIPSSYRSYVAPITSPRLWAAAK 167
           IIVSELLGS+GDNELSPECLDG +  LKP  ISIP  Y SYV PI S  +    K
Sbjct: 495 IIVSELLGSFGDNELSPECLDGVTGFLKPTTISIPQKYTSYVKPIMSTHIHQTIK 549



 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +2

Query: 347 TNNRRQATLTWDVQQDNIMHGFGGYFDCTLYGNEMISIVPGTHSPGMISWFPVFFQLRHQ 526
           ++N R  ++ + + ++  + GF GYFD  LY   M+SI P TH+PGM+SWFP    LR Q
Sbjct: 621 SSNERSDSIEFVMDRNADLMGFAGYFDLQLYKTVMLSIEPSTHTPGMVSWFPAVIPLRDQ 680



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = +1

Query: 502 SLFPIKTPMRVQKGDKITATFWRCVDSRRVWYEWVVEVGNR-----STPLHNANGRSSEM 666
           ++ P++  +RV +GD+I+    R VD+  VWYEW VE         STP+ N NG S  M
Sbjct: 673 AVIPLRDQLRVGEGDRISLKIDRKVDNTGVWYEWHVEKKKTNGESVSTPIQNPNGESYYM 732


>Z81549-10|CAI79203.1|  128|Caenorhabditis elegans Hypothetical
           protein F55C9.12 protein.
          Length = 128

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = +3

Query: 141 SPRLWAAAKIATSGIPQQKDKNLETLWVVYMQNKHDIAKQSSSSRLTIHPK 293
           +P  +  A+   +G PQ   K  ++    Y++ K + A   +++  TIHPK
Sbjct: 42  TPDTFPEAEAVATGAPQSPPKTTKSTREKYLEGKAEEALFPTAAASTIHPK 92


>AL132862-23|CAB60559.1|  540|Caenorhabditis elegans Hypothetical
           protein Y73F8A.30 protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 267 TSFVLQYHVYSACKQPIMFRGSYLFVGEFLKLLFSRQPITWETLW 133
           T+F+L  H+     +P+    SY+F G   + L  R P     LW
Sbjct: 299 TAFILNVHLQKMYAKPVSPIVSYIFFGRIAQWLRMRPPTMLLELW 343


>U41010-2|AAF98588.1|  585|Caenorhabditis elegans Trehalase protein
           2 protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 544 DKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNAN 648
           D I    W   +    W+++ VE GN +T  H+ N
Sbjct: 357 DTIRQVLWN--EEHNCWFDFDVEEGNHATSFHDTN 389


>AJ512334-1|CAD54508.2|  585|Caenorhabditis elegans trehalase
           protein.
          Length = 585

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 544 DKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNAN 648
           D I    W   +    W+++ VE GN +T  H+ N
Sbjct: 357 DTIRQVLWN--EEHNCWFDFDVEEGNHATSFHDTN 389


>AF130443-1|AAD28468.1|  956|Caenorhabditis elegans EAG K+ channel
           EGL-2 protein.
          Length = 956

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 615 HFNYPFVPYTTRVNTPPERCCYFITLLYSHWCLNWKKTGN 496
           H+N P    TT V  P     Y  +L Y+  C++    GN
Sbjct: 415 HYNIPLSNKTTLVGGPSRTSAYISSLYYTMSCMSTVGFGN 454


>AF036695-1|AAB88348.2|  956|Caenorhabditis elegans Egg laying
           defective protein 2 protein.
          Length = 956

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 615 HFNYPFVPYTTRVNTPPERCCYFITLLYSHWCLNWKKTGN 496
           H+N P    TT V  P     Y  +L Y+  C++    GN
Sbjct: 415 HYNIPLSNKTTLVGGPSRTSAYISSLYYTMSCMSTVGFGN 454


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 487  HSWAMCTRNNADHFITIK 434
            H W +C  +N DH++T++
Sbjct: 2095 HPWPVCQFDNGDHYVTVQ 2112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,960,463
Number of Sequences: 27780
Number of extensions: 443565
Number of successful extensions: 1118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)