Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30045
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z32683-6|CAA83623.1|  728|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AC006673-10|AAP31433.1|  361|Caenorhabditis elegans Serpentine r...    29   3.0  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z72514-3|CAA96673.1|  741|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U41010-5|AAV28334.1|  975|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-...    27   9.2  
AL117203-19|CAN86631.1|  358|Caenorhabditis elegans Hypothetical...    27   9.2  
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical...    27   9.2  
AF036706-3|ABD94091.1|  204|Caenorhabditis elegans Hypothetical ...    27   9.2  

>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 115 HFSSFLQYSNRFFRCRLSVAERNIASAENLLT 210
           HF S L+YS+ FFR  L   E + +    L+T
Sbjct: 48  HFKSVLKYSDHFFRLHLITDENHRSDIHELMT 79


>Z32683-6|CAA83623.1|  728|Caenorhabditis elegans Hypothetical
           protein R07E5.8 protein.
          Length = 728

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = -2

Query: 639 IQLGKTTEKLLSHLNLIENEVNHPDETVNNESNKTGIVNDK 517
           ++ G +  KL    + +++ V HP++T  N SN+T  + D+
Sbjct: 491 VEGGMSDPKLQMQCHFLKSLVLHPNDTFENHSNRTNQILDQ 531


>AC006673-10|AAP31433.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein89 protein.
          Length = 361

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 76  SYFSVSSAISCSLHFSSFLQYSNRFFRC 159
           S F+++++I C + FS   QY   FF+C
Sbjct: 310 SLFTINASIHCLICFSMSHQYRKTFFKC 337


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 22/84 (26%), Positives = 30/84 (35%)
 Frame = -2

Query: 423 IVCSSCPSGSTSKVKTRSEAII*VS*SRPGYRRCSRTLLRATYCRSSSARCTTTRPVPPQ 244
           I   + P     K  TRS +    + +RP     S      +   +  AR TTTR   P 
Sbjct: 286 IPAPAVPRPVAGKPSTRSASTTGAARTRPAVPAVSAPRALTSRAPAGPARPTTTRSATPA 345

Query: 243 NRRGLPHGAHPGQEVLGAGDVPLR 172
            R  +P  A    +   A   P R
Sbjct: 346 TRTAVPPRATAPPKAAPASKAPTR 369


>Z72514-3|CAA96673.1|  741|Caenorhabditis elegans Hypothetical
           protein T10B10.3 protein.
          Length = 741

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = -1

Query: 343 PSRIPSMFANALESDV-LSELIRALHD 266
           P+ IPS+ + A++ DV L EL+R  H+
Sbjct: 210 PTEIPSILSQAIDQDVLLDELVRTRHN 236


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 21/84 (25%), Positives = 30/84 (35%)
 Frame = -2

Query: 423 IVCSSCPSGSTSKVKTRSEAII*VS*SRPGYRRCSRTLLRATYCRSSSARCTTTRPVPPQ 244
           I   + P     K  TRS +    + +RP     S      +   +  A  TTTR   P 
Sbjct: 308 IPAPAVPRPVAGKPSTRSASTTGAARTRPAIPAVSAPRALTSRAPTGPACPTTTRSAAPA 367

Query: 243 NRRGLPHGAHPGQEVLGAGDVPLR 172
            R  +P  A    +   A   P+R
Sbjct: 368 TRTAVPPRATAPPKAASASKAPIR 391


>U41010-5|AAV28334.1|  975|Caenorhabditis elegans Hypothetical protein
            T05A12.4b protein.
          Length = 975

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 478  ISEAVATEKDVQKLVAPVNSVQFMSQWKYLKGQDEVRSYYLSIIEPSRI 332
            + E    E + +K   P +S Q     +Y+KGQ  ++    + IEP  I
Sbjct: 882  VEEEDEMETNEEKSNTPCSSTQDEGNLEYVKGQKHIQKLAFAAIEPITI 930


>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
            T05A12.4a protein.
          Length = 1622

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 478  ISEAVATEKDVQKLVAPVNSVQFMSQWKYLKGQDEVRSYYLSIIEPSRI 332
            + E    E + +K   P +S Q     +Y+KGQ  ++    + IEP  I
Sbjct: 882  VEEEDEMETNEEKSNTPCSSTQDEGNLEYVKGQKHIQKLAFAAIEPITI 930


>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
            x-hybridizingprotein 1, isoform a protein.
          Length = 1876

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 327  RCSRTLLRATYCRSSSARCTTTRPVPPQNRRGLP 226
            R  +T ++  Y  SS+   TTT P P Q  R +P
Sbjct: 1284 RVIQTKMQQVYTTSSTISSTTTSPAPTQKPRIVP 1317


>AL117203-19|CAN86631.1|  358|Caenorhabditis elegans Hypothetical
           protein Y48C3A.17d protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
 Frame = -1

Query: 502 SSPESVKLISEAVATEKDVQKLVAPVNSVQFMSQWKYL---KGQDEVRSYYLSIIEPSRI 332
           SSP+ +KL        +D++  V P ++    S   YL    G+    S + S+I+P  +
Sbjct: 255 SSPKHIKLEEPEEIDTEDLETFVLPPSTSASQSNAPYLPETPGRGLFFSPFKSLIDPCIL 314

Query: 331 PSMFANALESDVLS 290
           PS F++ L S  ++
Sbjct: 315 PS-FSDDLTSGYIN 327


>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
           protein Y47D3A.26 protein.
          Length = 1205

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 379 DEVRSYYLSIIEPSRIPSMFANALE 305
           D +  YY ++IE + +P MF  A+E
Sbjct: 531 DVINGYYGTVIELAEVPDMFRTAVE 555


>AF036706-3|ABD94091.1|  204|Caenorhabditis elegans Hypothetical
           protein T07A9.14 protein.
          Length = 204

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 430 APPVSAHPSPWPLPPISTSPT 492
           +PP S+ P+P P P  S+SPT
Sbjct: 169 SPPPSSTPTPTPPPSSSSSPT 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,382,318
Number of Sequences: 27780
Number of extensions: 271441
Number of successful extensions: 1307
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)