Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10476
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   153   1e-37
AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical ...    36   0.026
L14331-4|AAA28097.1|  352|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81587-6|CAB04704.1|  417|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical p...    28   9.2  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  153 bits (372), Expect = 1e-37
 Identities = 67/81 (82%), Positives = 73/81 (90%)
 Frame = +1

Query: 508 SGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGT 687
           +GGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHIG  STV+R  
Sbjct: 170 AGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDA 229

Query: 688 SAGRKVGLIAARKTGRIRGGK 750
           SAG+KVGLIAAR+TGRIRGGK
Sbjct: 230 SAGKKVGLIAARRTGRIRGGK 250



 Score =  133 bits (321), Expect = 2e-31
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = +1

Query: 4   MGRVIRAQRRGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 183
           MGR IR QR+GAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60

Query: 184 VHFRDPYKFKTRKELFIAPEG 246
           + FRDPYK+KT K   +A EG
Sbjct: 61  IAFRDPYKYKTVKTTVVAAEG 81



 Score =  132 bits (318), Expect = 4e-31
 Identities = 54/97 (55%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
 Frame = +2

Query: 221 RSSSLLPKALHS-QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLXEKMGDRGRLARASGN 397
           +++ +  + +H+ QF++CG KA +++GN++PVG +PEGT +CN+  K GDRG +ARASGN
Sbjct: 73  KTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGN 132

Query: 398 FATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 508
           +ATVI HNPD K+TR++LPSGAKKV+ S NR M+G+V
Sbjct: 133 YATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLV 169


>AF045646-7|AAK29833.2|  321|Caenorhabditis elegans Hypothetical
           protein F56B3.8 protein.
          Length = 321

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +2

Query: 296 GNVMPVGAMPEGTIVCNLXE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 472
           GN  P+G++  GT++ ++      D     +A+G  AT++ H  D   T VKLP   +  
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217

Query: 473 LPSSNRGMVGIVLEVDVLTNLF*KLEGH 556
           L  +    VG +   D+   +F   + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245


>L14331-4|AAA28097.1|  352|Caenorhabditis elegans Hypothetical
           protein K12H4.3 protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 604 VAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARKTGRIRGGKTDTK 762
           V+ N +   H  G H +I K   VK       KV  I A KT  + G + DT+
Sbjct: 264 VSPNVIRREHRKGQHSYIEKQLAVKASNIKQAKVTEILAEKTVDLVGKEFDTQ 316


>Z81587-6|CAB04704.1|  417|Caenorhabditis elegans Hypothetical
           protein T06G6.8 protein.
          Length = 417

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
 Frame = -2

Query: 603 TTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSRTIPTMPLLLDGRTFLAPDGSFTLVRLAS 424
           T+ +W A T    L   PS  ++    TSTS T   +P      TF AP  S        
Sbjct: 223 TSSVWKATTTPSDLPTKPSRTRSL---TSTSTTTAKLP-TTTSTTFAAPQASTEPSEATE 278

Query: 423 GLCPITVAKFPEARARRPLSPIFSXR-LHTMVPSGIAPTGITFPTSRVA 280
            L   T A  P   + R ++ I   R L +   + +  T     T+R+A
Sbjct: 279 ALATATPADLPTKPSGREITTITGTRKLSSTSTTKLPKTASKTSTARLA 327


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 115 HGYIKGVVKDIIHDPGRGAPLAVVHFR 195
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 115 HGYIKGVVKDIIHDPGRGAPLAVVHFR 195
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +2

Query: 410 IGHNPDAKRTRVKLPSGAKKVL 475
           IGH  D +RTR  LP+G KKVL
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVL 77


>Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical
           protein Y57G11C.44 protein.
          Length = 155

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +1

Query: 52  VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 177
           +S  ++RK +     LD+++  G  K ++KDI +D  +  P+
Sbjct: 1   MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,322,106
Number of Sequences: 27780
Number of extensions: 444975
Number of successful extensions: 1081
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)