Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10454
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 76 3e-14
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 76 3e-14
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 62 4e-10
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 59 3e-09
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 47 2e-05
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 37 0.015
Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical pr... 33 0.25
AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear recep... 33 0.25
AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear recep... 33 0.25
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 31 1.0
Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical pr... 29 3.1
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 3.1
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 3.1
Z81057-5|CAB02917.2| 846|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 4.0
AL021483-5|CAA16346.1| 255|Caenorhabditis elegans Hypothetical ... 29 5.3
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 28 7.1
CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical ... 28 7.1
AF039716-7|AAB96735.3| 617|Caenorhabditis elegans Sodium:neurot... 28 9.3
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 76.2 bits (179), Expect = 3e-14
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Frame = +3
Query: 228 YRH--CGNLL-HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH C ++ ++ +VG A+K+ + EG VKRE+LF+T+K+WNT H + + L +
Sbjct: 40 YRHIDCAHVYQNQKEVGEALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSD 99
Query: 399 LDLDYVNLYLIHWPIALHENASI-----------SQTDYVETWQA 500
L L YV+L LIHWP E A + S DY+ETW+A
Sbjct: 100 LQLSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKA 144
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +2
Query: 497 SYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGI 676
+++ G +SIG+SNF Q++R+ V P+ LQVE++ Q L ++CK +GI
Sbjct: 144 AFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGI 203
Query: 677 VVVAYTPFGN 706
VVV Y+P GN
Sbjct: 204 VVVGYSPLGN 213
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTR 258
LKLN+G IP G+GTW + K EV +++ A+ AGYRHID A +Y +
Sbjct: 5 LKLNSGYSIPAIGLGTW------QSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQ 52
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 76.2 bits (179), Expect = 3e-14
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 14/105 (13%)
Frame = +3
Query: 228 YRH--CGNLL-HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH C ++ ++ +VG A+K+ + EG VKRE+LF+T+K+WNT H + + L +
Sbjct: 40 YRHIDCAHVYQNQKEVGEALKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSD 99
Query: 399 LDLDYVNLYLIHWPIALHENASI-----------SQTDYVETWQA 500
L L YV+L LIHWP E A + S DY+ETW+A
Sbjct: 100 LQLSYVDLMLIHWPQGYAEGAELFPAGENGKMRYSDVDYLETWKA 144
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +2
Query: 497 SYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGI 676
+++ G +SIG+SNF Q++R+ V P+ LQVE++ Q L ++CK +GI
Sbjct: 144 AFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKPACLQVELHPYFTQVKLREFCKEKGI 203
Query: 677 VVVAYTPFGN 706
VVV Y+P GN
Sbjct: 204 VVVGYSPLGN 213
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTR 258
LKLN+G IP G+GTW + K EV +++ A+ AGYRHID A +Y +
Sbjct: 5 LKLNSGYSIPAIGLGTW------QSKPGEVAAAIKTAVAAGYRHIDCAHVYQNQ 52
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E+ +G AIK+ + EGVVKRE+LF+TTK W + LR+SLK L L+YV+LYL
Sbjct: 54 NEEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLA 113
Query: 432 HWPIALHENAS 464
H P A +++ S
Sbjct: 114 HMPAAFNDDMS 124
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +2
Query: 500 YDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIV 679
+D V GL K++GVSN+N Q+ R + G QVE++L Q +D+CK I
Sbjct: 138 FDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQHDHVDFCKKHNIS 197
Query: 680 VVAYTPFGN 706
V +Y G+
Sbjct: 198 VTSYATLGS 206
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/51 (45%), Positives = 34/51 (66%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
+KL+NG E+P G+GTW + + EV +V+ A+ AGYR IDTA++Y
Sbjct: 8 IKLSNGVEMPVIGLGTWQSSPA------EVITAVKTAVKAGYRLIDTASVY 52
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 69.7 bits (163), Expect = 2e-12
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Frame = +3
Query: 228 YRHCGNLL---HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH +E Q+G A+ + AEG++KRED+F+TTK + + V ALR SLK
Sbjct: 43 YRHIDTATLYQNEHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKR 102
Query: 399 LDLDYVNLYLIHWPIALHENASISQTDYVE 488
L LDYV+LYL H P + ++ S VE
Sbjct: 103 LRLDYVDLYLAHIPASTKDDGSFRSDVKVE 132
Score = 54.8 bits (126), Expect = 7e-08
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 500 YDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIV 679
+++V GLTK+IGVSNFN Q+ R+ + V Q+E++L L Q A + CK I+
Sbjct: 138 FEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHASQLELHLYLPQKAHRELCKKHNIL 197
Query: 680 VVAYTPFGN 706
+ AY G+
Sbjct: 198 ITAYATLGS 206
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +1
Query: 91 PVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
P+ L+NG +P G+GTW ++ G+E + + A+ AGYRHIDTA +Y
Sbjct: 6 PIFTLSNGVLMPSIGLGTW------QMTGEEGKTVIRNAVLAGYRHIDTATLY 52
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 62.5 bits (145), Expect = 4e-10
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E +G+ + + I+ G +KRED+FVT+KL T H E V + LK L L+Y++LYLI
Sbjct: 53 NEHIIGKVLHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLI 112
Query: 432 HWPI----------ALHENASISQTD--YVETWQAM 503
H P L EN ++ T+ +++TW+A+
Sbjct: 113 HCPFPFKHQEGSFAPLMENGELAVTEIAHIDTWRAL 148
Score = 54.0 bits (124), Expect = 1e-07
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
+++ +G K++GVSNF+ QL+ L V P+ QVE ++ Q L CK G+ V
Sbjct: 149 EKLYKEGKLKALGVSNFSCNQLQALYDAAEVKPANQQVECHIYWPQQELRALCKKLGVTV 208
Query: 683 VAYTPFGNLFNR--QPSAPAPRADDQRLVPSPKNTRKPFRKSYSDI 814
AY P G+ + +P P D L P K + K+ + I
Sbjct: 209 TAYAPLGSPGRKAARPDGVWPEG-DPLLEPIVKQLAAKYHKTAAQI 253
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGD-EVQKSVEWAIDAGYRHIDTAAIY 249
+ LN G ++P FG+GTW ++K + E+ ++ A+DAGYR IDTA +Y
Sbjct: 6 IPLNTGAQLPLFGLGTW------QVKDEAELTVALRAALDAGYRLIDTAHLY 51
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E ++GR ++K + +KRED+++T+KL +N + ++ +SL NL ++Y++L LI
Sbjct: 50 NEAKIGRILEKLLPANGLKREDIWITSKLAPSNAGVKKARESIEESLSNLKVEYLDLLLI 109
Query: 432 HWP-IALHENASISQTDYVETWQAMTE 509
HWP +L ++ VE+W M E
Sbjct: 110 HWPGSSLKSENPANKKLRVESWNVMCE 136
Score = 55.2 bits (127), Expect = 5e-08
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +2
Query: 509 VLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVA 688
++ +G +S+GVSNF I LE LK + V P+V QVE + + Q L+ YC I A
Sbjct: 137 MMAEGKLRSVGVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQDDLVKYCNENNIHFQA 196
Query: 689 YTPFGNLFNRQPSAPAP 739
Y+ G+ R+ + P
Sbjct: 197 YSSLGSPTYRKQLSEEP 213
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 121 IPGFGIGTWLGTNSNELKGDEVQKSV-EWAIDAGYRHIDTAAIYSTRTR 264
+P GIGTW +++ +E+ + V + GYR IDTA +Y+ +
Sbjct: 11 MPLIGIGTW------QVQKEEILRQVIDAGFKEGYRFIDTAQVYNNEAK 53
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTPF 700
G +SIG++NFNI Q+E++ ++G + P+VLQVE+N L Q + +C+ +GI++ A+
Sbjct: 159 GKIRSIGLANFNIGQVEQVWTKGLIKPAVLQVEMNPFLDQEEIRQFCREKGIILTAFMLT 218
Query: 701 GN 706
GN
Sbjct: 219 GN 220
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 19/114 (16%)
Frame = +3
Query: 228 YRHCGNLL---HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKN 398
YRH + L ++++V IK V+RE+LF+++K+WNT H + + + + L+
Sbjct: 42 YRHIDSALSFKNQEEVAAGIKDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEI 101
Query: 399 LDLDYVNLYLIHWPIALHEN----------------ASISQTDYVETWQAMTES 512
+ Y++L +IHWP E+ S DY+ETW+A+ ++
Sbjct: 102 FETTYMDLIVIHWPFGWAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALEDA 155
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 85 LAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTR 258
+A + LN+G E+P G GTW +L + + V A++AGYRHID+A + +
Sbjct: 3 IADTVTLNSGYEMPVIGYGTW------QLPKNLAAERVRDALEAGYRHIDSALSFKNQ 54
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 48.4 bits (110), Expect = 6e-06
Identities = 21/65 (32%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +3
Query: 249 LHEDQVGRAIKKKIAEGVVKREDLFVTTKLW-NTNHKKEAVLPALRKSLKNLDLDYVNLY 425
L+E ++G A+K + + + R D+F+T+K + + + +EA + +SL++L DY+++Y
Sbjct: 58 LNEKELGEALKILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMY 117
Query: 426 LIHWP 440
L+H+P
Sbjct: 118 LVHYP 122
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +2
Query: 521 GLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYT 694
G +SIGVSN+ I LE LK+ V P Q+E + + + L YCK + I A++
Sbjct: 152 GKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYHPHFARIPLQKYCKEKNIFFQAFS 209
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 100 KLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
KLN+G IP G GT+ ++ G+ V +++ A+ AGYR DTA Y
Sbjct: 14 KLNSGYNIPFVGFGTY------KVTGENVPPAIDAALTAGYRMFDTAKYY 57
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKK-EAVLPALRKSLKNLDLDYVNLYL 428
+E +G ++KK + + + RED+F+TTK+ N E L SL L DYV+L L
Sbjct: 59 NETFLGNSLKKYLPQFGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLL 118
Query: 429 IHWP 440
IH+P
Sbjct: 119 IHYP 122
Score = 35.9 bits (79), Expect = 0.035
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 503 DRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVV 682
++ G +SIGVSN+ + L + + P + Q E L + L +C IVV
Sbjct: 148 EKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQPYLTRPTLKKFCDLNNIVV 207
Query: 683 VAYT 694
+Y+
Sbjct: 208 QSYS 211
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 100 KLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRT 261
K ++G E+P G LG + E + D + S+E A+ +GYR DTA +Y T
Sbjct: 13 KFSDGYEMPKIG----LGISRIETQQD-LDVSIEAALKSGYRQFDTANLYKNET 61
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +2
Query: 461 LNFPNRL-RGDV-ASYDRVLNQGLTKSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNL 634
LN N++ R D + +++ +G +SIGVSN+ +E ++S + P V Q+E + +
Sbjct: 120 LNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYHPHF 179
Query: 635 QQSALLDYCKAQGIVVVAYTPFG 703
Q+ L YC I+ A++P G
Sbjct: 180 QRKVLRAYCNKNEILFQAFSPLG 202
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +1
Query: 94 VLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIY 249
+ KL NG+EIP +GT+ E KGD++ +V+ A+ GYR DTA Y
Sbjct: 1 MFKLKNGQEIPKLALGTY------EAKGDQLFAAVDEALKVGYRSFDTAKYY 46
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLDYVNLYLI 431
+E ++G A++ + + +KRED+F+TTK+ + E V + +SL L Y+++YLI
Sbjct: 49 NEKEIGDALEILLPKHNLKREDIFITTKM--HPNTVENVKKLVDESLSLLKTSYIDMYLI 106
Query: 432 HWPIALH--ENASISQTDYVETWQAMTE 509
H+P + + +++T + TW + E
Sbjct: 107 HYPKSFDYGDQDPMNKTLRIATWNDLWE 134
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 515 NQGLTKSIGVSNFNIQQLERLKSEG-GVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAY 691
N G +S+GVS+F I+ LE LK G P QVE + + + L +YCK++GI A+
Sbjct: 137 NAGKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYHPHFTREELKNYCKSEGIFFQAF 196
Query: 692 T 694
+
Sbjct: 197 S 197
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYS 252
+KLN G + P G+GT+ ++ GD+V ++ A+ AGYR DTA +Y+
Sbjct: 3 IKLNTGYDCPLIGLGTY------KIIGDQVLPVLDAALTAGYRLFDTAKVYN 48
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 252 HEDQVGRAIKKKIAEGVVKREDLFVTTKLWN 344
+E+ +G AIK+ IAEGVVKREDLF+TTK+ N
Sbjct: 94 NEEFIGTAIKEVIAEGVVKREDLFITTKVPN 124
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 97 LKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYS 252
L L+N +P G+GTW SN ++V +V+ A+ GY IDTA+ Y+
Sbjct: 48 LTLSNAHSMPAVGLGTW---QSN---AEDVISAVKAAVKNGYSLIDTASGYN 93
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 530 KSIGVSNFNIQQLERLKSEGGVTPSVLQVEINLNLQQSALLDYCKAQGIVVVAYTP 697
+SIGVSN++I+ L+ L + P QVE++ Q+ L +YC GI+ + Y P
Sbjct: 138 RSIGVSNYSIEDLDELLEFASILPHANQVELHPWFHQADLKNYCDELGILTMGYCP 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +3
Query: 195 GGMGDRRWL*AYRHCGNLLHEDQVGRAIKKKIAEGV----VKREDLFVTTKLWNTNHKKE 362
GG L + + CG L + ++K++ V V RE++F++TKLW + E
Sbjct: 24 GGYYHDAVLHSIKKCGYRLIDTAKRYGVEKQLGIAVKNCSVPREEMFLSTKLWPVDCGDE 83
Query: 363 AVLPALRKSLKNLDLDYVNLYLIHWP 440
V A + S + L DY+++Y+IH P
Sbjct: 84 -VYNAFQTSCEKLQTDYLDMYMIHMP 108
Score = 31.5 bits (68), Expect = 0.76
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 85 LAPVLKLNNGKEIPGFGIGTWLGTNSNELKGDEVQKSVEWAIDAGYRHIDTAAIYSTRTR 264
+ P L+N E+P G+GT T+S D V S++ GYR IDTA Y +
Sbjct: 1 MIPTTVLSNNVEMPLIGLGT---THSGGYYHDAVLHSIK---KCGYRLIDTAKRYGVEKQ 54
Query: 265 SDVPLRRRS 291
+ ++ S
Sbjct: 55 LGIAVKNCS 63
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 375 ALRKSLKNLDLDYVNLYLIHWPIALHENAS 464
ALR SLK L L+YV+LYL H P A ++ S
Sbjct: 65 ALRDSLKKLHLEYVDLYLAHMPTAFSDDMS 94
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 500 YDRVLNQGLTKSIGVSNFNIQQL 568
+D V GL K++GVSN+N Q+
Sbjct: 108 FDAVYKAGLAKAVGVSNWNNDQI 130
>Z36237-1|CAA85271.2| 619|Caenorhabditis elegans Hypothetical
protein C48D5.1 protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 148 LGTNSNELKGDEVQKSVEWAIDAGYRHI----DTAAIYSTRTRSDVPLRRRSQREWSREK 315
L ++EL+ D+ ++D+ Y D IY+ R++ PLRR RE S+
Sbjct: 4 LSIQTDELQ-DQFSNCSPASVDSSYSSCSSVEDEIEIYTRLVRNEEPLRRDFFREMSKNS 62
Query: 316 ICSSLQSYG 342
CSS YG
Sbjct: 63 SCSSSFDYG 71
>AY204167-1|AAO39171.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 148 LGTNSNELKGDEVQKSVEWAIDAGYRHI----DTAAIYSTRTRSDVPLRRRSQREWSREK 315
L ++EL+ D+ ++D+ Y D IY+ R++ PLRR RE S+
Sbjct: 4 LSIQTDELQ-DQFSNCSPASVDSSYSSCSSVEDEIEIYTRLVRNEEPLRRDFFREMSKNS 62
Query: 316 ICSSLQSYG 342
CSS YG
Sbjct: 63 SCSSSFDYG 71
>AF083224-1|AAD03682.1| 619|Caenorhabditis elegans nuclear receptor
NHR-6 protein.
Length = 619
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 148 LGTNSNELKGDEVQKSVEWAIDAGYRHI----DTAAIYSTRTRSDVPLRRRSQREWSREK 315
L ++EL+ D+ ++D+ Y D IY+ R++ PLRR RE S+
Sbjct: 4 LSIQTDELQ-DQFSNCSPASVDSSYSSCSSVEDEIEIYTRLVRNEEPLRRDFFREMSKNS 62
Query: 316 ICSSLQSYG 342
CSS YG
Sbjct: 63 SCSSSFDYG 71
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 276 IKKKIAEGVVKREDLFVTTKLWNTNHK--KEAVLPALRKSLKNLDLDYVNLYLIHWPIAL 449
+KK+ + ++ D+ K W +N K + PAL +L L DYVN+ L+ P L
Sbjct: 128 VKKEYDKLQSQKIDVEKDCKTWKSNPKFNQSEDFPALDSNLVKLGKDYVNISLVDVP--L 185
Query: 450 HENASISQTDYVET 491
N + Q T
Sbjct: 186 GRNVHLGQAPVTNT 199
>Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical
protein Y57G11C.6 protein.
Length = 482
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 276 IKKKIAEGVVKREDLFVTTKLWNTNHK--KEAVLPALRKSLKNLDLDYVNLYLIHWPIAL 449
+KK+ + + D+ K W N K + PAL +L ++ DYVN+ + P L
Sbjct: 185 VKKEFEKLQSMKVDVEKECKTWKANSKYNQSEDFPALDSNLLKVEKDYVNISRVEIP--L 242
Query: 450 HENASISQTDYVET 491
N I Q +T
Sbjct: 243 GRNIYIGQVPVKDT 256
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +2
Query: 410 LRESIFNSLADRSARKRLNFPNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEG 589
+R ++ D SAR + L D R + Q LT V+ FN+ +L+ L + G
Sbjct: 344 IRGNLMGKRVDFSARTVITADPNLPIDTVGVPRTIAQNLTFPEIVTPFNVDKLQELVNRG 403
Query: 590 GVT-PSVLQVEINLNLQ-QSALLDYCKAQGIVVVAYTPFGNL--FNRQPS 727
P + ++L+ D G V + G++ FNRQP+
Sbjct: 404 DTQYPGAKENGARVDLRYHPRAADLHLQPGYRVERHMKDGDIIVFNRQPT 453
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +2
Query: 410 LRESIFNSLADRSARKRLNFPNRLRGDVASYDRVLNQGLTKSIGVSNFNIQQLERLKSEG 589
+R ++ D SAR + L D R + Q LT V+ FN+ +L+ L + G
Sbjct: 344 IRGNLMGKRVDFSARTVITADPNLPIDTVGVPRTIAQNLTFPEIVTPFNVDKLQELVNRG 403
Query: 590 GVT-PSVLQVEINLNLQ-QSALLDYCKAQGIVVVAYTPFGNL--FNRQPS 727
P + ++L+ D G V + G++ FNRQP+
Sbjct: 404 DTQYPGAKENGARVDLRYHPRAADLHLQPGYRVERHMKDGDIIVFNRQPT 453
>Z81057-5|CAB02917.2| 846|Caenorhabditis elegans Hypothetical
protein F10D11.6 protein.
Length = 846
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 438 ASELNIDSRNPNPNSSMIS*GPA--KPPPSCGSCSIA 334
A+ NI +R P I+ GP +PPP C CS A
Sbjct: 395 ATYTNIGARPKYPPPPTIAGGPVAVQPPPDCSKCSAA 431
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = -3
Query: 498 LATSPRNLFGKLRRFRAERSASELNIDSRNPNPNSSMIS*GPAKPPP 358
L+TS L + RR R ER N S P P S + P PPP
Sbjct: 324 LSTSTSTLL-RTRRERLEREEEGRNSSSMTPQPQSLVPPPPPPPPPP 369
>AL021483-5|CAA16346.1| 255|Caenorhabditis elegans Hypothetical
protein Y38H8A.2a protein.
Length = 255
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 261 QVGRAIKKKIAEGVVKREDLFVTTKLWNTNHKKEAVLPALRKSLKNLDLD 410
Q G+A K + R++ KLWN +K ++ +LR+ DL+
Sbjct: 115 QTGQAAKPSHRKSEAARKEYSTKAKLWNFEYKGRPLVVSLRRDATYGDLE 164
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 361 SFLWFVFHSFVVTNRSSLLT-TPSAIFFLMARPTWSSWSRLPQCRYAYSQR 212
S +W VF + + +S ++ +P+ F TW W+R P+ +YA R
Sbjct: 5 SIVWMVFGVWTLGVKSQVIVQSPNISTF----GTWQPWARCPEGQYANGMR 51
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -2
Query: 361 SFLWFVFHSFVVTNRSSLLT-TPSAIFFLMARPTWSSWSRLPQCRYAYSQR 212
S +W VF + + +S ++ +P+ F TW W+R P+ +YA R
Sbjct: 5 SIVWMVFGVWTLGVKSQVIVQSPNISTF----GTWQPWARCPEGQYANGMR 51
>CU457741-7|CAM36348.1| 710|Caenorhabditis elegans Hypothetical
protein C42C1.7 protein.
Length = 710
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 402 DLDYVNLYLIHWPIALHENASISQTDYVE 488
D+ Y +LYLIHWPI + + YVE
Sbjct: 332 DISY-SLYLIHWPIYAYCKLTYPNNIYVE 359
>AF039716-7|AAB96735.3| 617|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 1
protein.
Length = 617
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 818 TKYLSTICGTVFLYFWAMARDAGR 747
TK+LST+C ++ YFW AGR
Sbjct: 119 TKFLSTLCLFLYYYFWTF--HAGR 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,895,819
Number of Sequences: 27780
Number of extensions: 441433
Number of successful extensions: 1656
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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