Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10444X
         (417 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   103   7e-23
Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...    77   5e-15
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    33   0.11 
Z82082-11|CAH10808.1|  721|Caenorhabditis elegans Hypothetical p...    29   1.8  
Z82082-9|CAB04966.2|  586|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AL132902-16|CAB82004.2|  721|Caenorhabditis elegans Hypothetical...    29   1.8  
U46674-4|AAA85756.1|  574|Caenorhabditis elegans Hypothetical pr...    27   5.5  
U40954-6|ABQ13043.1|  127|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z82287-3|CAB05313.3|  772|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z66520-10|CAA91391.2|  600|Caenorhabditis elegans Hypothetical p...    26   9.5  
AF039053-1|AAC25883.1|  341|Caenorhabditis elegans Seven tm rece...    26   9.5  

>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical
           protein T05E11.3 protein.
          Length = 760

 Score =  103 bits (246), Expect = 7e-23
 Identities = 46/84 (54%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   QHHIYYIAGSSRAEVEKSPFAERLVXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKE 182
           Q  IYY+AG+SR EVE SPF ERL+ +GYEVL+LTEAVDE CI +  EYE  KFQN+AKE
Sbjct: 512 QDAIYYMAGTSRKEVETSPFVERLIAKGYEVLFLTEAVDEYCIQAMPEYESKKFQNVAKE 571

Query: 183 IFDLEEGDRAKEKLEAYKKQYEXL 254
              +++G++AKE  +  +++++ L
Sbjct: 572 GVTIDDGEKAKEAHKGLEEEFKPL 595



 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
 Frame = +2

Query: 227 GLQEAVRXAARWLGDK-LGSWITRTTV*QRXXXXXXXXXXXXFGWTGNMERLALSNAHQK 403
           GL+E  +    WL +  L   I +  V QR            +GW+GNMER+  S A+ K
Sbjct: 587 GLEEEFKPLTDWLKETALKDLIEKAVVSQRLVKSPSALVASSYGWSGNMERIMKSQAYAK 646

Query: 404 ADDP 415
           A DP
Sbjct: 647 AKDP 650


>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score = 77.0 bits (181), Expect = 5e-15
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   QHHIYYIAGSSRAEVEKSPFAERLVXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKE 182
           Q  IYYI G S+  V  S F ER+  RG+EVLY+ + +DE C+    EY+G K  ++ KE
Sbjct: 458 QTQIYYITGESKDVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKE 517

Query: 183 IFDLEEGDRAKEKLEAYKKQYEXL 254
             +L E +  K+K E  K  YE L
Sbjct: 518 GLELPETEEEKKKFEEDKVAYENL 541


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 32.7 bits (71), Expect = 0.11
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 3   QHHIYYIAGSSRAEVEKSPFAERLVXRGYEVLYLTEAVDE 122
           Q  IYY+  ++R   E SP+ E +  +  EVL+L +  DE
Sbjct: 457 QKEIYYMYANNRQLAESSPYYEVIKSQNKEVLFLYDPADE 496


>Z82082-11|CAH10808.1|  721|Caenorhabditis elegans Hypothetical
           protein Y71A12B.12a protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 18  YIAGSSRAEVEKSP-FAERLVXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKEIF 188
           Y+A  S   +   P FA+RL+   Y   Y  + + E  I   H         I KE+F
Sbjct: 354 YLAVQSMKHLPSMPIFADRLLMDAYYFFYEADCLAEIVIHHSHRVRQDDISFICKELF 411


>Z82082-9|CAB04966.2|  586|Caenorhabditis elegans Hypothetical
           protein Y71A12B.12b protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 18  YIAGSSRAEVEKSP-FAERLVXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKEIF 188
           Y+A  S   +   P FA+RL+   Y   Y  + + E  I   H         I KE+F
Sbjct: 219 YLAVQSMKHLPSMPIFADRLLMDAYYFFYEADCLAEIVIHHSHRVRQDDISFICKELF 276


>AL132902-16|CAB82004.2|  721|Caenorhabditis elegans Hypothetical
           protein Y71A12B.12a protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = +3

Query: 18  YIAGSSRAEVEKSP-FAERLVXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKEIF 188
           Y+A  S   +   P FA+RL+   Y   Y  + + E  I   H         I KE+F
Sbjct: 354 YLAVQSMKHLPSMPIFADRLLMDAYYFFYEADCLAEIVIHHSHRVRQDDISFICKELF 411


>U46674-4|AAA85756.1|  574|Caenorhabditis elegans Hypothetical
           protein T26A8.4 protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +2

Query: 164 PEHRQGNIRPGGRRPRQGEAGGLQEAVRXAAR 259
           P H  G+  P  +RP  G  GG +   R  A+
Sbjct: 130 PSHDDGDFDPRSKRPYYGGRGGFRGGFRNGAK 161


>U40954-6|ABQ13043.1|  127|Caenorhabditis elegans Hypothetical
           protein ZK813.7 protein.
          Length = 127

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 316 GPLARSAGRQRLRLDRQHGAPRPLQRAPEG 405
           GP+ RS+  +  R  R++  P PL + P G
Sbjct: 71  GPIRRSSESRESRERRKNNTPNPLNQQPTG 100


>Z82287-3|CAB05313.3|  772|Caenorhabditis elegans Hypothetical
           protein ZK550.3 protein.
          Length = 772

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 222 ASPWRGRLPPGRIFPW 175
           + PWRGR+ P  I+P+
Sbjct: 283 SGPWRGRMTPHTIYPF 298


>Z66520-10|CAA91391.2|  600|Caenorhabditis elegans Hypothetical
           protein F49E12.6 protein.
          Length = 600

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 27  GSSRAEVEKSPFAERL---VXRGYEVLYLTEAVDEXCISSXHEYEGHKFQNIAKEIFDLE 197
           GSS  EV     A ++     R Y+++ + EA+D    ++   Y+    +++ K +FDL+
Sbjct: 117 GSSTREVHLETVARKMNVEKRRIYDIVNVMEALDAMQKTNKSYYQWQGLESLPKLMFDLQ 176


>AF039053-1|AAC25883.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 52 protein.
          Length = 341

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 186 FDLEEGDRAKEKLEAYKKQYEXLRAGWATSWAAGSLAPPFSSAWPARP 329
           F ++     K+KL+ +   Y+ L+  +  +    +LAP F    PA P
Sbjct: 215 FGVQMSRHMKQKLQNFSATYQRLQQQFFRALIVQTLAPTFLYVLPAGP 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,028,561
Number of Sequences: 27780
Number of extensions: 99526
Number of successful extensions: 410
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)