Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV10398
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 33 0.24
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 31 0.75
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 31 0.75
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 31 0.75
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 31 0.75
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 25 2.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 25 2.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 25 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.0
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.0
Z77652-9|CAB01116.1| 220|Caenorhabditis elegans Hypothetical pr... 28 5.3
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 28 6.9
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 32.7 bits (71), Expect = 0.24
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKP--PSKYNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGW 24
P+ V HP Y PS Y D A++ + V P CL + AV + TGW
Sbjct: 124 PHRVTAVSIHPWYNIGFPSSY-DFAIMRIHPPVNTSTTARPICLPSLPAVENRLCVVTGW 182
Query: 23 GLT 15
G T
Sbjct: 183 GST 185
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 37 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 94
Query: 20 LTENRG 3
L +N G
Sbjct: 95 LGDNSG 100
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 37 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 94
Query: 20 LTENRG 3
L +N G
Sbjct: 95 LGDNSG 100
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 197 PYAVIRAHRHPDYKPPSKYNDIAL-LELDRQVPLDQYTVPACLHTGDAVNDERASATGWG 21
PY V H D +PP +N+ AL E D++V QY P +++ + ++ T G
Sbjct: 108 PYRVNLQHSS-DTRPPQGFNNSALPFETDQRVKHMQYNSPLGIYSDKSAAEQYVQQT-QG 165
Query: 20 LTENRG 3
L +N G
Sbjct: 166 LGDNSG 171
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 58 PSMTSGPPPPAGDSP 14
P S PPPPAG SP
Sbjct: 296 PPTGSPPPPPAGGSP 310
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 40 PPPPAGDSPRTGA 2
PPPP SP TG+
Sbjct: 320 PPPPPRGSPPTGS 332
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 58 PSMTSGPPPPAGDSP 14
P S PPPPAG SP
Sbjct: 281 PPTGSPPPPPAGGSP 295
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 40 PPPPAGDSPRTGA 2
PPPP SP TG+
Sbjct: 305 PPPPPRGSPPTGS 317
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1
Query: 58 PSMTSGPPPPAGDSP 14
P S PPPPAG SP
Sbjct: 275 PPTGSPPPPPAGGSP 289
Score = 22.2 bits (45), Expect(2) = 2.8
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 40 PPPPAGDSPRTGA 2
PPPP SP TG+
Sbjct: 299 PPPPPRGSPPTGS 311
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 58 PSMTSGPPPPAGDSPRTG 5
P +T GPPPP G P TG
Sbjct: 707 PPITGGPPPPPGLPPITG 724
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 58 PSMTSGPPPPAGDSPRTG 5
P +T GPPPP G P TG
Sbjct: 707 PPITGGPPPPPGLPPITG 724
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 251 NLVPNSAPRPARDHEPVPPYAVIRAHRHPDYKPPSKYNDIALLELDRQV 105
++ PNS P +H P +I H H Y+ K +D+ +E+ Q+
Sbjct: 648 SVAPNSRPLKRDEHNPHRELQLINGHEHV-YRHFQKTHDVGCVEVAFQI 695
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 58 PSMTSGPPPPAGDSPRTG 5
P +T GPPPP G P TG
Sbjct: 290 PPITGGPPPPPGLPPITG 307
>Z77652-9|CAB01116.1| 220|Caenorhabditis elegans Hypothetical
protein C06B3.6 protein.
Length = 220
Score = 28.3 bits (60), Expect = 5.3
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = -3
Query: 275 AIVKQKHLNLVPNSAPRPARDHEPVPPYAVIRAHR---HPDY-KPPSKYNDIALLELDRQ 108
AIVK +H N AP A+D EP+ Y++ + R + ++ S+ +D + +DR+
Sbjct: 26 AIVKIEHFE---NDAPSEAKDFEPLVVYSLNKKKRWEINQEFLDSSSEGDDSKSVIIDRE 82
Query: 107 VPLDQYTVPACL---HTGDAVNDER 42
+P D Y L H+ D VN +
Sbjct: 83 IP-DLYFAWWSLGNVHSHDCVNHSK 106
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 143 YNDIALLELDRQVPLDQYTVPACLHTGDAVNDERASATGWGL 18
+NDIA+ EL+ + + PACL + + R TG+ L
Sbjct: 120 FNDIAVFELEEPIEFSKDIFPACLPSAPKI--PRIRETGYKL 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,531,155
Number of Sequences: 27780
Number of extensions: 297542
Number of successful extensions: 1270
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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