Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30171
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28940-7|AAA68353.2|  294|Caenorhabditis elegans Mitochondrial p...    54   1e-07
Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z50044-6|CAA90358.1|  223|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z99281-35|CAB16518.2|  524|Caenorhabditis elegans Hypothetical p...    28   5.3  
Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso...    27   9.3  
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso...    27   9.3  
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor...    27   9.3  
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor...    27   9.3  
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor...    27   9.3  
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor...    27   9.3  
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor...    27   9.3  

>U28940-7|AAA68353.2|  294|Caenorhabditis elegans Mitochondrial
           prohibitin complexprotein 2 protein.
          Length = 294

 Score = 53.6 bits (123), Expect = 1e-07
 Identities = 29/83 (34%), Positives = 42/83 (50%)
 Frame = +2

Query: 2   LTELSFGKEYTXXXXXXXXXXXXXXXXXXXXXRAKQERQQKIVQXXXXXXXXXXXXXXXX 181
           LTEL+F  +Y+                     RAKQ++Q+KIVQ                
Sbjct: 183 LTELAFSPQYSAAVEAKQVAAQEAQRATFYVERAKQQKQEKIVQAEGEAESAKLLGEAMK 242

Query: 182 XNPGYLKLRKIRAAQSISRMIAQ 250
            +PG+LKLRKIRAAQ I+R++++
Sbjct: 243 NDPGFLKLRKIRAAQKIARIVSE 265


>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 655 IGVTGAPPSRF-WF*AFFGALKVFIDHFLVSPYVPIN 548
           +G+TG  P    WF  ++G   +++D  +   Y+PI+
Sbjct: 369 LGITGGRPDHSSWFVGYYGDQIIYLDPHVAHEYIPID 405


>Z50044-6|CAA90358.1|  223|Caenorhabditis elegans Hypothetical
           protein F22B5.6 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 635 PLEVLVLSFFWSFEGLY*P 579
           PL +L+ +F W+F GLY P
Sbjct: 198 PLHILLTAFSWTFSGLYRP 216


>Z99281-35|CAB16518.2|  524|Caenorhabditis elegans Hypothetical
           protein Y57G11C.17 protein.
          Length = 524

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -3

Query: 431 FLKLETVISSFRVAAGFRFSAHTLSASCYFFLVSFS 324
           FL   T+ +   +A GF    H  S  C F L SFS
Sbjct: 98  FLPCSTISNYAFIAIGFLLQIHMSSFQCIFVLYSFS 133


>Z92806-4|CAB07259.1|  727|Caenorhabditis elegans Hypothetical
           protein K10G4.4 protein.
          Length = 727

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -3

Query: 425 KLETV-ISSFRVAAGFRFSAHTLSASCYFFLVSFSD 321
           KL+ V I+SF +A   +  +H  +ASC+F  ++F D
Sbjct: 127 KLKAVSINSFYLAGPVQQVSHLSTASCFFNSINFDD 162


>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform g protein.
          Length = 1604

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1068 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1126


>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform f protein.
          Length = 1818

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1282 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1340


>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform e protein.
          Length = 1954

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1418 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1476


>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform b protein.
          Length = 1685

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1467 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1525


>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform d protein.
          Length = 1995

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1459 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1517


>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform h protein.
          Length = 2006

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1470 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1528


>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
            abnormality protein1, isoform a protein.
          Length = 2007

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +1

Query: 166  G*SHGHEPWLFKT*ENSCCSKYFENDCSISNRVFLPGNSLMINLQDPTFDDLSEKLTKKK 345
            G S   E W F      C S +++   S S  +F    S   N + P F ++S KL  ++
Sbjct: 1471 GDSQWTEKWYFDQSSGDCSSFWWDECTSSSQNIFPDEKSCTSNCKHPGF-EISSKLATEE 1529


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,415,497
Number of Sequences: 27780
Number of extensions: 213819
Number of successful extensions: 527
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)