Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30055
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 71 7e-13
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 46 2e-05
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 45 6e-05
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 40 0.002
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 40 0.002
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 35 0.078
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 34 0.10
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 34 0.10
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 33 0.32
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 30 1.7
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 1.7
AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical ... 29 2.9
U97405-7|AAB53006.1| 125|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 29 3.9
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 29 3.9
AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical ... 29 5.1
AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical ... 29 5.1
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 28 6.8
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 28 6.8
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 28 9.0
U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astaci... 28 9.0
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 28 9.0
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 9.0
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 71.3 bits (167), Expect = 7e-13
Identities = 44/117 (37%), Positives = 57/117 (48%)
Frame = +2
Query: 347 SNTVPTSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRH 526
S +S ALRAL +E K+LQ +PVEGF + + EDNLF W V I+GPP TLYQ +
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTIDV-NEDNLFVWTVGIYGPPKTLYQGGYFKA 61
Query: 527 T*NSPLTTRIHHHPLGFLTKVWASKCI*KRRSLHIDSPPARGMILSLANCPCERWEP 697
+ P + F TKVW + + L I + CERW P
Sbjct: 62 SIRFPSNYPYSPPSMKFTTKVWHPN-VYENGDLCISILHSPIDDPQSGELACERWNP 117
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/46 (58%), Positives = 28/46 (60%)
Frame = +3
Query: 576 F*LKSGHPNVYENGDLCISILHPPVG*SSVWRTAPANVGNPTQSVR 713
F K HPNVYENGDLCISILH P+ A NPTQSVR
Sbjct: 78 FTTKVWHPNVYENGDLCISILHSPIDDPQSGELA-CERWNPTQSVR 122
Score = 48.4 bits (110), Expect = 6e-06
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPPSIRVFN*SLGIQMYMKTEIFAYRFSTRPWDDPQSGEL 675
GYFKA ++FP +YPYSPPS++ +Y ++ P DDPQSGEL
Sbjct: 57 GYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDL-CISILHSPIDDPQSGEL 110
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/70 (27%), Positives = 39/70 (55%)
Frame = +2
Query: 383 LALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTTRIHH 562
L + ++ PV+GF L+ ++++++WEV + GPPDTLY+ + + P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 563 HPLGFLTKVW 592
+ F++++W
Sbjct: 68 PKMKFISEIW 77
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPN+ + G++CISILH P
Sbjct: 78 HPNIDKEGNVCISILHDP 95
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLY 505
AL+ L EYK L P EG + EDN FEWE I GP +T +
Sbjct: 5 ALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCF 49
Score = 34.3 bits (75), Expect = 0.10
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 594 HPNVYENGDLCISILHPP 647
HPN+Y +G +CISILH P
Sbjct: 79 HPNIYADGRVCISILHAP 96
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSIRVFN*SLGIQMYMKTEIFAYRFSTRPWDDPQSGEL 675
++G F A + FP DYP SPP +R +Y + P DDP EL
Sbjct: 50 ANGVFPARITFPQDYPLSPPKMRFTCGIFHPNIYADGRV-CISILHAPGDDPTGYEL 105
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDT 499
+SSA+R L +Y L ++PV+G + L EDN+ EW + G PDT
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKA-LPNEDNILEWHYCLRGSPDT 61
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDT 517
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ T
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGT 52
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 585 KSGHPNVYENGDLCISIL 638
K HPNVY +G +C+ IL
Sbjct: 75 KMFHPNVYADGSICLDIL 92
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDT 517
T+ + R L ++K LQE+P G EDN+ WE IFGP +T ++ T
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVSGAPT-EDNILTWEAIIFGPQETPFEDGT 52
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 585 KSGHPNVYENGDLCISIL 638
K HPNVY +G +C+ IL
Sbjct: 75 KMFHPNVYADGSICLDIL 92
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
AL+ L +Y+ L +EPV + L E N+ EW I G P T Y+
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYE 53
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
AL+ + E + L +P +G+D LF W+ I GPP++ YQ T + P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F T+++
Sbjct: 61 PFKPPKVAFTTRIY 74
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 34.3 bits (75), Expect = 0.10
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
AL+ + E + L +P +G+D LF W+ I GPP++ YQ T + P
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 551 RIHHHPLGFLTKVW 592
+ F T+++
Sbjct: 61 PFKPPKVAFTTRIY 74
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 32.7 bits (71), Expect = 0.32
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 371 ALRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQVDTSRHT*NSPLTT 550
AL+ + E L +P +G+D L+ W+ I GPP++ YQ T S T
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDD-LYHWQATIMGPPESPYQGGIFFLTITSRQTI 60
Query: 551 RIHHHPL 571
+H L
Sbjct: 61 HSNHQRL 67
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSI 570
+ G FK + FP DYP+ PP +
Sbjct: 47 NKGAFKVGITFPVDYPFKPPKV 68
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 480 IATSHSNRLSSPSNLTRKPSTGSSCRLLYSNAKALRAELV 361
+ +SN + SP+N +TG+SC +L+S+ K A V
Sbjct: 12 VGQPYSNLVISPNNRILATTTGASCEVLFSDKKGNDARRV 51
>AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical
protein Y6E2A.6 protein.
Length = 357
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 699 TQSVRNRYSPSGNLNPSKEPEHLSVPGERSM 791
T +VRN + P N N K+PE+ + G+ S+
Sbjct: 326 TGTVRNSWKPQTNGNSQKQPENYQMAGQTSV 356
>U97405-7|AAB53006.1| 125|Caenorhabditis elegans Hypothetical
protein T09B4.3 protein.
Length = 125
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 790 IDRSPGTERCSGSFEGLRLPEGEYRLRTDC-VGFPTFAGAVRQTED 656
IDRS ++ S+E L E E R + C +GF T A A +T +
Sbjct: 32 IDRSESLDQLKESYESLMKSENEKRKKDGCFIGFLTKALAEEETTE 77
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 594 HPNVYENGDLCISIL 638
HP++Y NG +C+SIL
Sbjct: 82 HPHIYSNGHICLSIL 96
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 362 TSSALRALALEYKSLQEEPVEGFRVKLLGEDN-LFEWEVAIFGPPDTLY 505
+ +A R L E L+ E EG V N L +W++ + G TLY
Sbjct: 2 SDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLY 50
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 29.1 bits (62), Expect = 3.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 505 SSGYFKAHMKFPPDYPYSPPSIR 573
+ G F +K P YP+SPP+++
Sbjct: 52 AGGMFDLDIKIPDQYPFSPPNVK 74
>AC024761-6|AAF59467.3| 599|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5a protein.
Length = 599
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 595 IQMYMKTEIFAYRFSTRPWDDPQSGEL--PLRTLGTLHNRFATGTPPLV--ISIPQRSP 759
+ Y IFA T P DP G + P+ T+G H PPL I +PQRSP
Sbjct: 203 VSTYPMAPIFAETIPTSPAKDPSEGYVTRPISTVG--H----PSPPPLFPNIPVPQRSP 255
>AC024761-5|AAU05550.1| 601|Caenorhabditis elegans Hypothetical
protein Y38C1AA.5b protein.
Length = 601
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 595 IQMYMKTEIFAYRFSTRPWDDPQSGEL--PLRTLGTLHNRFATGTPPLV--ISIPQRSP 759
+ Y IFA T P DP G + P+ T+G H PPL I +PQRSP
Sbjct: 205 VSTYPMAPIFAETIPTSPAKDPSEGYVTRPISTVG--H----PSPPPLFPNIPVPQRSP 257
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 585 KSGHPNVYENGDLCISIL 638
K HPN+ E+G +C+SIL
Sbjct: 99 KVWHPNINEDGSICLSIL 116
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 487 TAGYTLSSGYFKAHMKFPPDYPYSPPSI 570
T G G + + FP DYP PP++
Sbjct: 48 TLGTDFEGGIYHGRIIFPADYPMKPPNL 75
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 344 MSNTVPTSSA-LRALALEYKSLQEEPVEGFRVKLLGEDNLFEWEVAIFGPPDTLYQ 508
MS T +A +R L E L++ P E + + + EDNLFEW I G T ++
Sbjct: 1 MSEQYNTKNAGVRRLMKEAMELRQ-PTEMYHAQPM-EDNLFEWHFTIRGTLGTDFE 54
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 511 GYFKAHMKFPPDYPYSPP 564
GY+ +PP YPY PP
Sbjct: 297 GYYPPGYPYPPGYPYPPP 314
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 594 HPNVYENGDLCISIL 638
HPNVY +G +C+S+L
Sbjct: 83 HPNVYPSGTVCLSLL 97
>U00048-3|AAB53827.3| 315|Caenorhabditis elegans Nematode astacin
protease protein 4 protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 250 PGISTRHNNNELEILVNIASILQHPQV 170
PG+S +NNN +N SI+ HPQV
Sbjct: 290 PGVSGNNNNNNNN-QINSNSIVNHPQV 315
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 594 HPNVYENGDLCISIL 638
HPNVY +G +C+S+L
Sbjct: 83 HPNVYPSGTVCLSLL 97
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 596 SKCI*KRRSLHIDSPPARGMILSLANCPCERW 691
S+CI K H++ P A+ IL A+CP +W
Sbjct: 1797 SECICKSACEHVECPNAQVCILRKADCP-NKW 1827
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,762,579
Number of Sequences: 27780
Number of extensions: 493125
Number of successful extensions: 1298
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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