Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0223.Seq
         (801 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c...    33   0.31 
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph...    33   0.31 
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81058-6|CAB62801.2|  252|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z98866-14|CAB11553.1|  524|Caenorhabditis elegans Hypothetical p...    28   8.9  

>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division cycle
            related protein14, isoform b protein.
          Length = 1063

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +1

Query: 409  PRLMRRYRARQVALFGEMCAEPLFVYFSKYIQILSAHETITLINASIILKKEEYEYS-TF 585
            PR + +       L G+   E   ++ S Y+ +L+ H     +   II K+E+  +  T 
Sbjct: 836  PRKVSQVEKFASHLMGKQFEEDKLIH-SAYMFVLN-HPEAGAVTGPII-KEEDIPFEETV 892

Query: 586  PCRPYSLFCGILPSCFCSPRNAG-ESKRCSRSV 681
             C   +   GILP CF  PR    E   CS S+
Sbjct: 893  ECSSTTAVNGILPKCFRQPRKQKLEEDSCSSSI 925


>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosphatase
            isoform B protein.
          Length = 1063

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +1

Query: 409  PRLMRRYRARQVALFGEMCAEPLFVYFSKYIQILSAHETITLINASIILKKEEYEYS-TF 585
            PR + +       L G+   E   ++ S Y+ +L+ H     +   II K+E+  +  T 
Sbjct: 836  PRKVSQVEKFASHLMGKQFEEDKLIH-SAYMFVLN-HPEAGAVTGPII-KEEDIPFEETV 892

Query: 586  PCRPYSLFCGILPSCFCSPRNAG-ESKRCSRSV 681
             C   +   GILP CF  PR    E   CS S+
Sbjct: 893  ECSSTTAVNGILPKCFRQPRKQKLEEDSCSSSI 925


>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
           protein C27A2.1 protein.
          Length = 1076

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +1

Query: 601 SLFCGILPSCFCSPRNAGESKRCSRSV--GCTSG 696
           S+ CGI  +C  SP++ G S+R    +  GCT G
Sbjct: 57  SIICGICLACGGSPKSLGRSERIVEYIRHGCTEG 90


>Z81058-6|CAB62801.2|  252|Caenorhabditis elegans Hypothetical
           protein F11E6.6 protein.
          Length = 252

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 590 VALIPFFAAFCLPVFAHPE--TLVKVKDAQDQLGARVGYIRTGSQ 718
           +A I FFAA C+ V AH E   L  V D  D +    G +   SQ
Sbjct: 98  IAGIGFFAALCITVIAHCEDPQLAIVHDLADTIAFSAGLLYAWSQ 142


>Z98866-14|CAB11553.1|  524|Caenorhabditis elegans Hypothetical
           protein Y49E10.17 protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -3

Query: 682 QLILSIFYFHQRFWVSKNRKAKCRKKGNKGDTEMLNTHTLPFSILLKHLS 533
           +LI++  + + R W+ ++ +A CR K    D E++  +  P  + +K LS
Sbjct: 275 ELIINEAWVNYREWIDESFQAGCRLKYE--DREIILPNKTPLEVAMKDLS 322


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,591,511
Number of Sequences: 27780
Number of extensions: 367069
Number of successful extensions: 931
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)