Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0139
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.4
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 30 1.4
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 30 1.4
Z68004-8|CAA91989.1| 218|Caenorhabditis elegans Hypothetical pr... 29 1.9
U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical pr... 28 4.4
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 4.4
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 4.4
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical... 28 4.4
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 7.7
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +3
Query: 222 KDMASQGDYASKHQRWPKPPEL-SPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 398
+D +Q A H P PP + SP LP +P +P+T P +SPA +
Sbjct: 488 EDDGAQPSSAPVHTP-PAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLV 546
Query: 399 SVPSSDT 419
P++ T
Sbjct: 547 QKPTTPT 553
>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 463 RVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 329
++ D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 463 RVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 329
++ D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical
protein T24B8.7b protein.
Length = 2923
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 463 RVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 329
++ D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical
protein T24B8.7a protein.
Length = 2920
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 463 RVDDELIDKIQVLSHVSEEGTERLSEAGEVSGPDAVCVRVNDVSG 329
++ D L+D+++ + HV+ E E A + S +AV NDV G
Sbjct: 720 KLADPLLDRLENIRHVAHERFEASLNANQDSQSNAVFESTNDVFG 764
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 433 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 278
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 433 QVLSHVSEEGTERLS-EAGEVSGPDAVCVRVNDVSGCTGITGDTGR*MGDNSG 278
++L H+SE+ TE S +GE+SG + N+ SG D GDNSG
Sbjct: 508 EILEHISEKSTEESSGSSGEMSGDGS----DNEASGEGSGEYDASGSSGDNSG 556
>Z68004-8|CAA91989.1| 218|Caenorhabditis elegans Hypothetical
protein F47B10.9 protein.
Length = 218
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 529 ESHRFFHSGTTQGWSDRVSELTRVDDELIDKIQV-LSHVSEEGTE 398
E +FH T ++++ SE +DD D++ V LS+V EG E
Sbjct: 46 ELSEYFHILRTGSYTEKTSEKVTLDDVYTDELVVFLSYVCPEGFE 90
>U61953-1|AAC48075.2| 569|Caenorhabditis elegans Hypothetical
protein R08C7.6 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 279 PELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVP 407
P++ P LPV + + S+ + + E P SD+ SVP
Sbjct: 344 PKMPPFVLPVETSVGCDNMNSVAIVHSEIDTEFRPMSDSQSVP 386
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 419
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 669 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 719
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 419
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 725 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 775
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 270 PKPPELSPIYLPVSPVMPVQPL-TSLTLTQTASGPETSPASDNLSVPSSDT 419
P P +P PV+ P T+ T T T + +T+P + ++ PS+ T
Sbjct: 548 PTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTTPTTPVVTTPSTIT 598
>AL117204-42|CAB55146.2| 714|Caenorhabditis elegans Hypothetical
protein Y116A8C.4 protein.
Length = 714
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2
Query: 396 DCLKPAKFPDLTPSV*ELMTLAAAQASPG 310
D +KPA DL PSV + M L A SPG
Sbjct: 286 DKMKPAVLDDLVPSV-DFMGLVKAMISPG 313
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 288 SPIYLPVSPVMPVQPLTSLTLTQTAS----GPETSPASDNLSVPSSDT 419
S IYLP V+P +S+ L+ T S P+T PAS +++ ++ T
Sbjct: 502 SSIYLPQPAYPEVKPNSSVILSSTQSQNNTSPQTIPASASVTNSATST 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,309,807
Number of Sequences: 27780
Number of extensions: 274840
Number of successful extensions: 1011
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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