Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0080
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical...    32   0.31 
AL031627-21|CAA20970.1|  326|Caenorhabditis elegans Hypothetical...    27   6.7  
Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AL031627-22|CAI79188.1|  213|Caenorhabditis elegans Hypothetical
           protein Y102A5C.36 protein.
          Length = 213

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
 Frame = +2

Query: 233 LMELHFFYLHLFTYRTRNLL*IF*LKICM----INWXYNFIYTNSNCFHRLCLTLRSNIF 400
           L  L FF     ++     L  F  K C+    + + YNF+Y + NC   + ++L  N+F
Sbjct: 15  LKNLCFFVFPFVSFIILMFLVFFTGKKCLSAFKLIYFYNFLYFSPNCVETIFVSLGRNLF 74

Query: 401 LGGNRNYKSIICNPLFRNYIRKLNL 475
           L   R Y  I C   F +++ KL L
Sbjct: 75  LCLQRRY--IHC---FFHFLLKLTL 94


>AL031627-21|CAA20970.1|  326|Caenorhabditis elegans Hypothetical
           protein Y102A5C.33 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 6.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = +2

Query: 305 LKICMINWXYNFIYTNSNCFHRLCLTLRSNIFLGGNRNYKSIICNPLFRNYIRKLNL 475
           L IC++ +  + +      FH L  +L    FL  +  Y  +       NY+RKLN+
Sbjct: 102 LPICLLGYSLHIL---QQTFHLLLFSLAIMSFLKYHFPYDFLYSQNYISNYVRKLNV 155


>Z92784-3|CAB07194.1|  318|Caenorhabditis elegans Hypothetical
           protein F31C3.4 protein.
          Length = 318

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -2

Query: 223 FELFNHSLHFGKYNLLYKKLFQYLLCNILLKII 125
           FE+  H LH GKY +L K  F Y+   I++  I
Sbjct: 280 FEVIPHELHNGKYRIL-KMFFIYMGFAIVVAFI 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,145,165
Number of Sequences: 27780
Number of extensions: 194430
Number of successful extensions: 423
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)