BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0236.Seq (900 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z27080-1|CAA81600.1| 257|Caenorhabditis elegans Hypothetical pr... 130 2e-30 Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 33 0.21 Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 32 0.64 Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 32 0.64 Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical pr... 30 2.6 AL021481-7|CAA16331.3| 629|Caenorhabditis elegans Hypothetical ... 29 3.4 Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 28 7.9 >Z27080-1|CAA81600.1| 257|Caenorhabditis elegans Hypothetical protein F55H2.2 protein. Length = 257 Score = 130 bits (313), Expect = 2e-30 Identities = 57/82 (69%), Positives = 72/82 (87%) Frame = +2 Query: 2 YELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIP 181 Y+L GL +GG +A+LKKN+ A++LLVELA+LQT F+TLDE IK+TNRRVNAIEHVIIP Sbjct: 121 YDLTGLGKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIP 180 Query: 182 RLERTLAYIISELDELEREEFY 247 R+E TL YI++ELDE+EREEF+ Sbjct: 181 RIENTLTYIVTELDEMEREEFF 202 >Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical protein Y57G11A.3 protein. Length = 298 Score = 33.5 bits (73), Expect = 0.21 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +2 Query: 5 ELAGLARGGQQLAKLKKNFQSAVKLLVELASLQTSFVTLDEVIKIT 142 ELA L G Q+L K+KK+F++ +E +T L+E K+T Sbjct: 55 ELAALKAGNQELKKMKKDFETGAVHNIENEDDETKIARLEERQKLT 100 >Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical protein F32H2.1b protein. Length = 928 Score = 31.9 bits (69), Expect = 0.64 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 480 GPGTQFAL*WSYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 614 G T++A+ +YN L + W N V +L L P F SW Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273 >Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical protein F32H2.1a protein. Length = 944 Score = 31.9 bits (69), Expect = 0.64 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +3 Query: 480 GPGTQFAL*WSYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 614 G T++A+ +YN L + W N V +L L P F SW Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273 >Z30317-1|CAA82967.1| 213|Caenorhabditis elegans Hypothetical protein T16G12.4 protein. Length = 213 Score = 29.9 bits (64), Expect = 2.6 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = -1 Query: 177 MITCSMALTRLFVILITSSRVTNEVCSEANSTKSFTALWKFFFSF 43 +ITCS + +F++++ +T+ SEA ++ WK F F Sbjct: 103 IITCSQLILYVFLLIVIPIFLTDYFASEAQRYMNYPHEWKVFKDF 147 >AL021481-7|CAA16331.3| 629|Caenorhabditis elegans Hypothetical protein Y43F4B.2 protein. Length = 629 Score = 29.5 bits (63), Expect = 3.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +1 Query: 496 SPYSGRITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNS 657 SP+ T + P ++ + K+ L +L+ + I SP G+ KR AP+ + N+ Sbjct: 145 SPFEDEETPYHPDWF-LTNSKSHVLRSLMHYRPIANSPRGISTKRGAPLVIFNN 197 >Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical protein F38A6.2 protein. Length = 891 Score = 28.3 bits (60), Expect = 7.9 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = -2 Query: 683 LPFAISGAQLLGRAIGAGLFAITPAGE--RGMCCKAIKLGNARV 558 L F+ L G++IGA L T AGE G K +K G++RV Sbjct: 761 LDFSSDSQYLRGQSIGAHLLFWTKAGEICDGTSVKDVKWGSSRV 804 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,132,129 Number of Sequences: 27780 Number of extensions: 346048 Number of successful extensions: 893 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 856 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 893 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2286823924 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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