BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0235.Seq (823 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 105 3e-23 Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 40 0.002 AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical ... 30 1.7 Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical pr... 30 2.3 AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical ... 29 3.0 Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical pr... 29 4.0 Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical pr... 29 4.0 AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.0 AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.0 AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 4.0 AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium chann... 28 9.3 >Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical protein C47E8.5 protein. Length = 702 Score = 105 bits (253), Expect = 3e-23 Identities = 54/87 (62%), Positives = 65/87 (74%), Gaps = 1/87 (1%) Frame = -2 Query: 267 IKAETEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQ 88 ++ E DKNDK VKDLV+LL+ETALL+SGF+L+EPQ HASRIYRMIKLGL I +DE Sbjct: 616 LRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQSHASRIYRMIKLGLDIGDDEIED 675 Query: 87 VEEPASGDV-PPLEGDADDASRMEEVD 10 P+S +EG +DASRMEEVD Sbjct: 676 SAVPSSCTAEAKIEGAEEDASRMEEVD 702 Score = 31.1 bits (67), Expect = 1.00 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -3 Query: 302 LEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKS 153 LEINPDH+I++TLR + + + K ++ L+ + L P+S Sbjct: 604 LEINPDHAIMKTLRDRVEVDKNDKTVKDLVVLLFETALLASGFSLEEPQS 653 >Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical protein T05E11.3 protein. Length = 760 Score = 39.9 bits (89), Expect = 0.002 Identities = 23/78 (29%), Positives = 39/78 (50%) Frame = -2 Query: 249 ADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDEPIQVEEPAS 70 A + D LL+ETA L SGF+L + A RI +++ L + +D ++ E+ Sbjct: 680 ASEEDTTAASTAKLLFETATLRSGFSLQDQVGFADRIEAVLRQSLDVSQDAQVETEQHIE 739 Query: 69 GDVPPLEGDADDASRMEE 16 P E +A + + +EE Sbjct: 740 EAEP--EPEAAEETTIEE 755 >AC026301-2|AAK68896.2| 320|Caenorhabditis elegans Hypothetical protein Y54F10BM.5 protein. Length = 320 Score = 30.3 bits (65), Expect = 1.7 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +1 Query: 136 IDTGSMDLGLIKREARRQQGSFIQ*DNKI-LNSFVILVGFRFCLNVSTIE*SGLISK 303 +D + DLGL+ + R + D KI + SF+ ++ + C++V +IE GL+S+ Sbjct: 115 MDIAANDLGLLLKHVSRLYFANYVPDIKIFITSFINVLKAKKCIHVRSIELGGLLSR 171 >Z68108-2|CAA92135.1| 406|Caenorhabditis elegans Hypothetical protein T05A10.3 protein. Length = 406 Score = 29.9 bits (64), Expect = 2.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 105 EDEPIQVEEPASGDVPPLEGDADDASRMEEVD*D 4 ++EP++VEEP V P EGD AS E + D Sbjct: 182 DEEPVEVEEPV---VEPTEGDEQMASSSEHITKD 212 >AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical protein Y41D4A.6 protein. Length = 452 Score = 29.5 bits (63), Expect = 3.0 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = -2 Query: 174 TLDEPQVHAS---RIYRMIKLGLGIDEDEPIQVEEPASGDVPPLEG 46 +LD P + A + + +++L GID+++ VE P + LEG Sbjct: 184 SLDAPSIFAKTAQKCWELLELSKGIDKNDSTSVELPEKAGISSLEG 229 >Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein ZK1151.1h protein. Length = 3424 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2915 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2953 >Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein ZK1151.1a protein. Length = 3436 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965 >Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein ZK1151.1f protein. Length = 3322 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2813 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2851 >Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein ZK1151.1e protein. Length = 3323 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2814 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2852 >Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein ZK1151.1d protein. Length = 3405 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2896 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2934 >Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein ZK1151.1h protein. Length = 3424 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2915 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2953 >Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein ZK1151.1a protein. Length = 3436 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965 >Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein ZK1151.1f protein. Length = 3322 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2813 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2851 >Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein ZK1151.1e protein. Length = 3323 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2814 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2852 >Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein ZK1151.1d protein. Length = 3405 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2896 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2934 >Z78541-3|CAD44120.1| 733|Caenorhabditis elegans Hypothetical protein ZK1086.1a protein. Length = 733 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -3 Query: 320 WVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKSML 147 W+P P PD S+ E + ++ K T L +I M L +L + ++ P+S L Sbjct: 245 WIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPG--MDLSKVVLPTFILEPRSFL 300 >Z70269-4|CAA94223.2| 733|Caenorhabditis elegans Hypothetical protein ZK1086.1a protein. Length = 733 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -3 Query: 320 WVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKSML 147 W+P P PD S+ E + ++ K T L +I M L +L + ++ P+S L Sbjct: 245 WIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPG--MDLSKVVLPTFILEPRSFL 300 >Z70269-1|CAD44161.1| 770|Caenorhabditis elegans Hypothetical protein ZK1086.1b protein. Length = 770 Score = 29.1 bits (62), Expect = 4.0 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = -3 Query: 320 WVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILLSYCMKLPCCLLASRLMSPKSML 147 W+P P PD S+ E + ++ K T L +I M L +L + ++ P+S L Sbjct: 282 WIPSPKEVFGPDGSLTEEVGEENKSLIWTLLKQIRPG--MDLSKVVLPTFILEPRSFL 337 >AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein protein. Length = 3436 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965 >AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein protein. Length = 3436 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965 >AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein protein. Length = 3436 Score = 29.1 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Frame = -3 Query: 383 PVTTL*NDGPVNCNTTHYRANWVPGP--PLEINPDHSIVE 270 PVTT NDG +N +T +YR N + G PL D +++ Sbjct: 2927 PVTTALNDGLINASTGNYR-NSITGEDVPLSDTVDRGLID 2965 >AF043703-3|AAK21500.1| 357|Caenorhabditis elegans Calcium channel, beta subunit protein2 protein. Length = 357 Score = 27.9 bits (59), Expect = 9.3 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -3 Query: 362 DGPVNCNTTHY--RANWVPGPPLEINPDHSIVETLRQKRKPTRMTKLLRILL 213 D PV NT+ + R+ W P P ++ P + L + +R+T+LL + L Sbjct: 131 DPPVKHNTSDHQDRSIWEPKCPYKVVPSSRPIVLLGPTLQHSRLTQLLHLAL 182 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,850,798 Number of Sequences: 27780 Number of extensions: 400533 Number of successful extensions: 874 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 873 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 2029935014 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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