BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0220.Seq (903 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 65 7e-11 AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 63 2e-10 Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 61 1e-09 U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 59 4e-09 AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 2e-04 AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 3e-04 AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 42 6e-04 AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 42 6e-04 AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 42 6e-04 AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 42 8e-04 AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 38 0.007 AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 36 0.052 AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 34 0.12 Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 34 0.16 U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.16 L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 34 0.16 AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 34 0.16 AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.28 AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.28 L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.65 AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 31 0.85 AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 31 0.85 AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 31 0.85 AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 31 1.1 AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 31 1.1 U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 31 1.5 U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 31 1.5 AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 31 1.5 AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 31 1.5 Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 30 2.0 U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 30 2.0 U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 30 2.0 U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 30 2.0 U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 30 2.0 AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.6 Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.4 Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 6.0 Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 6.0 U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 6.0 U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 6.0 AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 6.0 AF025461-7|AAB70997.2| 330|Caenorhabditis elegans Seven tm rece... 28 7.9 AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 28 7.9 AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 28 7.9 >Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical protein F58E10.3a protein. Length = 561 Score = 64.9 bits (151), Expect = 7e-11 Identities = 38/93 (40%), Positives = 54/93 (58%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683 +D++ + KTGSGKTLA++LPA+VHI Q +RG+GP LVL E + Q+V+ DF Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTREL-AQQVQEVSIDF 225 Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782 H L C++ K + L RG IV+ Sbjct: 226 -CHSLGLKMTCLFGGASKGPQARDLERGVDIVV 257 Score = 64.1 bits (149), Expect = 1e-10 Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 4/162 (2%) Frame = +1 Query: 259 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 438 +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + + Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144 Query: 439 KTMGYKEPTPIQAQGWPIAMSGKI*LAYPKRVPAKRWPTSCQPL--CT*TTNRLFGE--V 606 +++PT IQ+ WPIAMSG+ ++ K K L T +R GE Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPA 204 Query: 607 MVRLLWSWAAXQRVSTTNFSKLLQILGHTSYVRNTCVFGGGS 732 ++ LL + Q+V + H+ ++ TC+FGG S Sbjct: 205 VLVLLPTRELAQQVQEVSID-----FCHSLGLKMTCLFGGAS 241 >AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical protein F53H1.1 protein. Length = 970 Score = 63.3 bits (147), Expect = 2e-10 Identities = 34/94 (36%), Positives = 53/94 (56%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLGGLXES*HNKFQQVAADF 683 +D++G+ KTGSGKTLA++LP HI +QP + GDGPIA++L E +++ A F Sbjct: 342 RDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKE-ANKF 400 Query: 684 GXHILCS*HVCVWWWFLKESKPGTLRRGXKIVIC 785 + C + + L+RG +IV+C Sbjct: 401 AKPLGLK-VACTYGGVGISEQIADLKRGAEIVVC 433 Score = 48.8 bits (111), Expect = 5e-06 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +1 Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432 V + F KNFY + + + EV+ YR + +TV G++ PI+ + + + Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317 Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507 +K Y +PT IQAQ P MSG+ Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342 >Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical protein C46F11.4 protein. Length = 811 Score = 60.9 bits (141), Expect = 1e-09 Identities = 23/42 (54%), Positives = 36/42 (85%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 629 +D++G+ KTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ Sbjct: 303 RDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIV 344 Score = 60.5 bits (140), Expect = 2e-09 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 4/103 (3%) Frame = +1 Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 435 + Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279 Query: 436 VKTMGYKEPTPIQAQGWPIAMSGKI*LAYPK----RVPAKRWP 552 ++ Y++PTPIQA P A+SG+ L K + A WP Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322 >U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical protein F01F1.7 protein. Length = 730 Score = 59.3 bits (137), Expect = 4e-09 Identities = 25/57 (43%), Positives = 36/57 (63%) Frame = +1 Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 +R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + + Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339 Score = 44.4 bits (100), Expect = 1e-04 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLGGLXES*HNKFQQV 671 +D++GV +TGSGKT A++LP +V I + P + R + GP A+++ E + ++ Sbjct: 339 RDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTREL-AQQIEEE 397 Query: 672 AADFGXHILCS*HVCVWWWFLKESKPGTLRRGXKIVI 782 FG +L V V +E + LR G ++VI Sbjct: 398 TNKFG-KLLGIKTVSVIGGASREDQGMKLRMGVEVVI 433 >AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical protein Y54G11A.3 protein. Length = 504 Score = 43.6 bits (98), Expect = 2e-04 Identities = 20/50 (40%), Positives = 31/50 (62%) Frame = +3 Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQ 587 + NG ++ S +D +GV +TGSGKTLA++LPA++HI+ Q Sbjct: 100 RKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149 Score = 39.1 bits (87), Expect = 0.004 Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 8/93 (8%) Frame = +1 Query: 253 FVSLQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEAN 411 F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89 Query: 412 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGK 507 + G ++ G+++P+PIQ+Q WP+ +SG+ Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQ 122 >AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical protein Y71H2AM.19 protein. Length = 643 Score = 43.2 bits (97), Expect = 3e-04 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +1 Query: 355 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 V +G +V PI F + + +++++ +KT GY PTP+Q P G+ Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204 Score = 29.1 bits (62), Expect = 4.5 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPP 593 +DL+ +TGSGKT A+++P + I P Sbjct: 204 RDLMSCAQTGSGKTAAFLVPLVNAILQDGP 233 >AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform c protein. Length = 660 Score = 41.9 bits (94), Expect = 6e-04 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +1 Query: 346 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 N V VSG V I++F EA F V + V GY +PTP+Q P ++ + Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177 Score = 34.3 bits (75), Expect = 0.12 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578 +DL+ +TGSGKT A++LP I HI Sbjct: 177 RDLMSCAQTGSGKTAAFLLPIIQHI 201 >AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform b protein. Length = 644 Score = 41.9 bits (94), Expect = 6e-04 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +1 Query: 346 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 N V VSG V I++F EA F V + V GY +PTP+Q P ++ + Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161 Score = 34.3 bits (75), Expect = 0.12 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578 +DL+ +TGSGKT A++LP I HI Sbjct: 161 RDLMSCAQTGSGKTAAFLLPIIQHI 185 >AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and belle-like helicase protein1, isoform a protein. Length = 641 Score = 41.9 bits (94), Expect = 6e-04 Identities = 20/54 (37%), Positives = 28/54 (51%) Frame = +1 Query: 346 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 N V VSG V I++F EA F V + V GY +PTP+Q P ++ + Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158 Score = 34.3 bits (75), Expect = 0.12 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578 +DL+ +TGSGKT A++LP I HI Sbjct: 158 RDLMSCAQTGSGKTAAFLLPIIQHI 182 >AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical protein H27M09.1 protein. Length = 630 Score = 41.5 bits (93), Expect = 8e-04 Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 629 +D++G+ TGSGKT+ ++LP ++ Q P R +GP L++ Sbjct: 228 RDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272 Score = 38.3 bits (85), Expect = 0.007 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Frame = +1 Query: 292 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 468 P + ++S + E R ++ G + PI F E FP + + + K G PT Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215 Query: 469 IQAQGWPIAMSGK 507 IQ QG P+A+SG+ Sbjct: 216 IQIQGIPVALSGR 228 >AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical protein Y23H5B.6 protein. Length = 732 Score = 38.3 bits (85), Expect = 0.007 Identities = 18/44 (40%), Positives = 24/44 (54%) Frame = +3 Query: 438 KDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAI 569 KDN + +A S D+VG KTGSGKTLA ++P + Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135 >AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical protein B0511.6 protein. Length = 544 Score = 35.5 bits (78), Expect = 0.052 Identities = 15/22 (68%), Positives = 19/22 (86%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAI 569 KD++ KTGSGKTLA++LPAI Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI 127 >AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical protein Y71G12B.8 protein. Length = 763 Score = 34.3 bits (75), Expect = 0.12 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 FE+ N + + GY +PTPIQ P+A++GK Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGK 186 Score = 28.3 bits (60), Expect = 7.9 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP 590 KD+ TG+GKT A++LP + + +P Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP 214 >Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical protein T26G10.1 protein. Length = 489 Score = 33.9 bits (74), Expect = 0.16 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = +3 Query: 435 CKDNGLQRTDAHSSSRLADSYVWKDLVGVPKTGSGKTLAYILPAIVHINNQP 590 C+ G + + L + KD++G+ +TGSGKT A+ +P + + + P Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP 110 >U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 33.9 bits (74), Expect = 0.16 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504 P + F EAN + +Q+ V GY + TPIQ P+ G Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378 Score = 28.3 bits (60), Expect = 7.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHI 578 D++ +TGSGKT A++LP + + Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403 >L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase protein. Length = 763 Score = 33.9 bits (74), Expect = 0.16 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504 P + F EAN + +Q+ V GY + TPIQ P+ G Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378 Score = 28.3 bits (60), Expect = 7.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHI 578 D++ +TGSGKT A++LP + + Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403 >AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line helicase protein 1 protein. Length = 763 Score = 33.9 bits (74), Expect = 0.16 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +1 Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504 P + F EAN + +Q+ V GY + TPIQ P+ G Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378 Score = 28.3 bits (60), Expect = 7.9 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHI 578 D++ +TGSGKT A++LP + + Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRL 403 >AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA helicase-3 protein. Length = 720 Score = 33.1 bits (72), Expect = 0.28 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +1 Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519 P + F +++ P +++ V+ GY TPIQ P+ GK LA Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340 Score = 29.5 bits (63), Expect = 3.4 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILP 563 KD++ +TGSGKT A++LP Sbjct: 336 KDILACAQTGSGKTAAFLLP 355 >AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line helicase protein 3 protein. Length = 720 Score = 33.1 bits (72), Expect = 0.28 Identities = 15/45 (33%), Positives = 24/45 (53%) Frame = +1 Query: 385 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 519 P + F +++ P +++ V+ GY TPIQ P+ GK LA Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340 Score = 29.5 bits (63), Expect = 3.4 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILP 563 KD++ +TGSGKT A++LP Sbjct: 336 KDILACAQTGSGKTAAFLLP 355 >L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical protein ZK686.2 protein. Length = 593 Score = 31.9 bits (69), Expect = 0.65 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQP 590 +D+ TGSGKT+ Y+LP + + ++P Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP 185 >AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical protein C24H12.4a protein. Length = 634 Score = 31.5 bits (68), Expect = 0.85 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLGGLXE 644 K+++G +TGSGKT A+++P + + + G GP A+++ E Sbjct: 127 KNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKE 174 >AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical protein Y94H6A.5a protein. Length = 825 Score = 31.5 bits (68), Expect = 0.85 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAI 569 KD+V + +TGSGKT A+++P + Sbjct: 62 KDVVAMSRTGSGKTAAFVIPML 83 Score = 29.1 bits (62), Expect = 4.5 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = +1 Query: 379 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 H +++ V + ++ G+ +PTPIQ + P M GK Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62 >AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical protein Y94H6A.5b protein. Length = 871 Score = 31.5 bits (68), Expect = 0.85 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAI 569 KD+V + +TGSGKT A+++P + Sbjct: 62 KDVVAMSRTGSGKTAAFVIPML 83 Score = 29.1 bits (62), Expect = 4.5 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = +1 Query: 379 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507 H +++ V + ++ G+ +PTPIQ + P M GK Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62 >AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical protein H20J04.4a protein. Length = 488 Score = 31.1 bits (67), Expect = 1.1 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQP 590 D++G +TG+GKTLA+ +P + ++ P Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP 155 >AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical protein H20J04.4b protein. Length = 561 Score = 31.1 bits (67), Expect = 1.1 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQP 590 D++G +TG+GKTLA+ +P + ++ P Sbjct: 128 DILGCARTGTGKTLAFAIPILQKLSVDP 155 >U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical protein F55F8.2b protein. Length = 579 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578 +D++G +TGSGKTLA+ +P + + Sbjct: 27 QDVLGAAETGSGKTLAFGIPLVARL 51 >U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical protein F55F8.2a protein. Length = 746 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578 +D++G +TGSGKTLA+ +P + + Sbjct: 194 QDVLGAAETGSGKTLAFGIPLVARL 218 >AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA helicase-4 protein. Length = 1156 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHI 578 D+V TGSGKTLA+++P ++ + Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKL 798 >AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase protein 4 protein. Length = 1156 Score = 30.7 bits (66), Expect = 1.5 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHI 578 D+V TGSGKTLA+++P ++ + Sbjct: 775 DVVACAHTGSGKTLAFLIPFVIKL 798 >Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical protein ZK512.2 protein. Length = 578 Score = 30.3 bits (65), Expect = 2.0 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHINN 584 D+V TGSGKTLA++LP + I N Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQN 73 >U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation factor-2 kinase EFK-1B isoform protein. Length = 760 Score = 30.3 bits (65), Expect = 2.0 Identities = 20/86 (23%), Positives = 37/86 (43%) Frame = -3 Query: 271 KVGAKQIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 92 ++G K ++ H + + P + + KSI + E S G T ++ Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698 Query: 91 IPVTRHDYFSDLVEDVYLNYGFFLTQ 14 P+TRH+ + + E +Y G+ L Q Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723 >U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation factor-2 kinase EFK-1A isoform protein. Length = 768 Score = 30.3 bits (65), Expect = 2.0 Identities = 20/86 (23%), Positives = 37/86 (43%) Frame = -3 Query: 271 KVGAKQIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 92 ++G K ++ H + + P + + KSI + E S G T ++ Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706 Query: 91 IPVTRHDYFSDLVEDVYLNYGFFLTQ 14 P+TRH+ + + E +Y G+ L Q Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731 >U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor kinase protein1, isoform a protein. Length = 768 Score = 30.3 bits (65), Expect = 2.0 Identities = 20/86 (23%), Positives = 37/86 (43%) Frame = -3 Query: 271 KVGAKQIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 92 ++G K ++ H + + P + + KSI + E S G T ++ Sbjct: 647 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 706 Query: 91 IPVTRHDYFSDLVEDVYLNYGFFLTQ 14 P+TRH+ + + E +Y G+ L Q Sbjct: 707 APLTRHEILAKMAE-MYKEGGYGLNQ 731 >U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor kinase protein1, isoform b protein. Length = 760 Score = 30.3 bits (65), Expect = 2.0 Identities = 20/86 (23%), Positives = 37/86 (43%) Frame = -3 Query: 271 KVGAKQIPIWATHVLTSREFFFPTKSSRSSKSIATVAKSRRIIAEFVASSKFGTTVSTAI 92 ++G K ++ H + + P + + KSI + E S G T ++ Sbjct: 639 EMGDKGAMLYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSF 698 Query: 91 IPVTRHDYFSDLVEDVYLNYGFFLTQ 14 P+TRH+ + + E +Y G+ L Q Sbjct: 699 APLTRHEILAKMAE-MYKEGGYGLNQ 723 >AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical protein Y47A7.1 protein. Length = 1114 Score = 29.9 bits (64), Expect = 2.6 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +1 Query: 13 PASERIHSLNKHLQLNPKNNHVW 81 PAS ++H L++ LQLN N+ W Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795 >Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical protein E03A3.2 protein. Length = 809 Score = 29.5 bits (63), Expect = 3.4 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +3 Query: 513 VGVPKTGSGKTLAYILPAIVH 575 V +P TG+GK+L Y LPA+VH Sbjct: 199 VSLP-TGAGKSLCYQLPAVVH 218 >Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical protein T20D3.5b protein. Length = 312 Score = 28.7 bits (61), Expect = 6.0 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -3 Query: 154 RRIIAEFVASSKFGTTVSTAIIPV 83 +++I +FVA S G T+STA P+ Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243 >Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical protein T20D3.5a protein. Length = 221 Score = 28.7 bits (61), Expect = 6.0 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -3 Query: 154 RRIIAEFVASSKFGTTVSTAIIPV 83 +++I +FVA S G T+STA P+ Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152 >U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. Length = 974 Score = 28.7 bits (61), Expect = 6.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504 F EAN + +++ V GY + TPIQ P+ G Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589 Score = 28.7 bits (61), Expect = 6.0 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIR-RGDG 611 D++ +TGSGKT A++LP + + ++ + G+G Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626 >U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2 protein. Length = 974 Score = 28.7 bits (61), Expect = 6.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504 F EAN + +++ V GY + TPIQ P+ G Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589 Score = 28.7 bits (61), Expect = 6.0 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIR-RGDG 611 D++ +TGSGKT A++LP + + ++ + G+G Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626 >AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line helicase protein 2 protein. Length = 974 Score = 28.7 bits (61), Expect = 6.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 504 F EAN + +++ V GY + TPIQ P+ G Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589 Score = 28.7 bits (61), Expect = 6.0 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +3 Query: 507 DLVGVPKTGSGKTLAYILPAIVHINNQPPIR-RGDG 611 D++ +TGSGKT A++LP + + ++ + G+G Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEG 626 >AF025461-7|AAB70997.2| 330|Caenorhabditis elegans Seven tm receptor protein 148 protein. Length = 330 Score = 28.3 bits (60), Expect = 7.9 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = -1 Query: 591 AVGCLCAQWLARCRPT--FCRNPFWVRQLNLSRHSYRPALSLNGRRFFVTHCLYTLLHII 418 +V C+C +A C T FC + + + S H R L LN R+ F+T T+L + Sbjct: 200 SVECVCI--IAVCFSTILFCASNIYFTMKSASGHMSRKTLELN-RQLFITLTFQTILPFV 256 >AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine receptor, class z protein9 protein. Length = 281 Score = 28.3 bits (60), Expect = 7.9 Identities = 14/58 (24%), Positives = 30/58 (51%) Frame = -1 Query: 501 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 328 R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+ Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86 >AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine receptor, class z protein8 protein. Length = 281 Score = 28.3 bits (60), Expect = 7.9 Identities = 14/58 (24%), Positives = 30/58 (51%) Frame = -1 Query: 501 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFD 328 R +YR N + + + Y + +I + F + + ++NLN T +L I+++F+ Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,680,067 Number of Sequences: 27780 Number of extensions: 456818 Number of successful extensions: 1333 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 1222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1329 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2297313942 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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