BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0212.Seq (526 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75547-8|CAA99898.1| 126|Caenorhabditis elegans Hypothetical pr... 54 8e-08 Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical pr... 31 0.38 AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical ... 31 0.67 U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 28 4.7 Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 27 6.2 Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 27 6.2 U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 27 6.2 Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 27 8.2 Z22180-5|CAA80174.2| 717|Caenorhabditis elegans Hypothetical pr... 27 8.2 >Z75547-8|CAA99898.1| 126|Caenorhabditis elegans Hypothetical protein R11D1.8 protein. Length = 126 Score = 53.6 bits (123), Expect = 8e-08 Identities = 29/70 (41%), Positives = 43/70 (61%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS +L W +IRNN+AFL +R I K FS E N+ ++S +Y+GL +K A+ V + K Sbjct: 1 MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAK 58 Query: 234 GFTVVYKKQR 263 G V K ++ Sbjct: 59 GVVVSTKNEK 68 >Z66565-5|CAA91482.2| 766|Caenorhabditis elegans Hypothetical protein T04F8.6 protein. Length = 766 Score = 31.5 bits (68), Expect = 0.38 Identities = 17/49 (34%), Positives = 28/49 (57%) Frame = +2 Query: 8 CEHVVFGVEIGLNRKNVVVTELDDHPQQQCIPCEEAQYQKAVQQGAEQC 154 CEH+ + I R+N+++ ELD + QQ I EA Y +++ E+C Sbjct: 275 CEHMQKQIHIANQRRNMLIEELDQN--QQSI---EASYNNRLKEMEERC 318 >AF039052-5|AAF98626.2| 586|Caenorhabditis elegans Hypothetical protein T22D1.4 protein. Length = 586 Score = 30.7 bits (66), Expect = 0.67 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = -3 Query: 278 RAFW*PLLLVHYCESLPVRVLHDTNSFLVNQAVVPEGVEVSHIVRLLAERLFDIALLHK 102 R + P + + E+ PV+V ++ NS V +V +EVSH + E I L+HK Sbjct: 179 RVIYGPYVNIPAFETKPVKVHYENNSPFVIATIVERFIEVSHWGNIAVEEY--IELVHK 235 >U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine receptor, class r protein10 protein. Length = 385 Score = 27.9 bits (59), Expect = 4.7 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -1 Query: 151 LFGSLLNGFLILRFFTRNALLLRMIIQFS 65 L SL+NG I FF N LL +I+ F+ Sbjct: 255 LLWSLINGIYITSFFNSNPLLYSIILGFN 283 >Z81540-1|CAB04402.1| 186|Caenorhabditis elegans Hypothetical protein F46B3.1 protein. Length = 186 Score = 27.5 bits (58), Expect = 6.2 Identities = 14/43 (32%), Positives = 21/43 (48%) Frame = +2 Query: 65 TELDDHPQQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDS 193 ++ +D Q PCE QYQK + C PP + V + D+ Sbjct: 59 SDTNDECQLDMSPCETDQYQKICPKTCNVC--PPAICVDQWDN 99 >Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical protein F57F5.5 protein. Length = 707 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 135 SKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVY 251 SK P ++H F + ++ K + G V +RKG VY Sbjct: 366 SKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVY 404 >Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical protein F57F5.5 protein. Length = 707 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 135 SKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVY 251 SK P ++H F + ++ K + G V +RKG VY Sbjct: 366 SKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVY 404 >U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C protein. Length = 707 Score = 27.5 bits (58), Expect = 6.2 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 135 SKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVY 251 SK P ++H F + ++ K + G V +RKG VY Sbjct: 366 SKVPGGTLSIHDFTFMKVLGKGSFGKVMLAERKGTDEVY 404 >Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein F12F6.6 protein. Length = 1126 Score = 27.1 bits (57), Expect = 8.2 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 363 TAQTYARLPFVVLQPSSAPRGPLKQKRLRQPQPS 464 T Q +A +P V PS+ P GPL Q + P P+ Sbjct: 113 TPQQFAAVPQSVQAPSATPAGPL-QAMQQAPAPT 145 >Z22180-5|CAA80174.2| 717|Caenorhabditis elegans Hypothetical protein K11H3.4 protein. Length = 717 Score = 27.1 bits (57), Expect = 8.2 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -1 Query: 127 FLILRFFTRNALLLRMIIQFSDDDIFTV*TYFYT 26 +L +RFF N L+ M ++ DDDI T FYT Sbjct: 372 YLTIRFFFENFLIYPMEMEDIDDDI----TVFYT 401 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,278,079 Number of Sequences: 27780 Number of extensions: 232892 Number of successful extensions: 583 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 583 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1028310386 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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