BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0206.Seq (840 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 99 4e-21 U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical pr... 31 0.77 U97015-5|AAB52344.2| 362|Caenorhabditis elegans Hypothetical pr... 29 3.1 AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical ... 29 5.4 U97003-5|AAB52272.1| 353|Caenorhabditis elegans Hypothetical pr... 28 9.5 >Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical protein D2085.1 protein. Length = 2198 Score = 98.7 bits (235), Expect = 4e-21 Identities = 42/95 (44%), Positives = 61/95 (64%) Frame = -2 Query: 539 KDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHV 360 K L F +++++ W KH ++P P+ HAE++ AA++ MA + +R VHI HV Sbjct: 1568 KMYLNETFSTLKMDNISDWAKHLSAFPANRPIVCHAEKQTLAAILCMAQMANRAVHIAHV 1627 Query: 359 ARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDI 255 A +EI ++K AK+RG VTCEVCPHHLFL D+ Sbjct: 1628 ATADEINLVKEAKQRGWNVTCEVCPHHLFLIEEDL 1662 Score = 93.9 bits (223), Expect = 1e-19 Identities = 49/107 (45%), Positives = 65/107 (60%) Frame = -3 Query: 829 NIVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDY 650 ++ +LPG +D+HVHVREPGA K + + +T I AMPNT+P +VD +F Sbjct: 1472 SLKRLPGMVDIHVHVREPGATHKEDW-ATCSKAALAGGVTTILAMPNTSPVLVDTDSFYQ 1530 Query: 649 ASTLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFTT 509 LA + DYALY+GA+ N E A +AA LKMYLNETF+T Sbjct: 1531 TEQLASAKSVVDYALYIGATPNNSKFAAEFADKAAGLKMYLNETFST 1577 Score = 88.2 bits (209), Expect = 6e-18 Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%) Frame = -1 Query: 240 GRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENP--PPGYPGLETILPL 67 G +V P L PED+ LW N+ ID FATDHAPHT EK ++ PPG+PG+E +LPL Sbjct: 1665 GIREVRPRLVKPEDRQALWDNMEYIDCFATDHAPHTWAEKTGKDGKIPPGFPGVEYMLPL 1724 Query: 66 LLNAVHQGRLTIEDLLCRI 10 LL AVH G+LT+++L R+ Sbjct: 1725 LLTAVHDGKLTMKELTDRM 1743 >U50312-1|AAA92318.1| 285|Caenorhabditis elegans Hypothetical protein B0222.1 protein. Length = 285 Score = 31.5 bits (68), Expect = 0.77 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = -1 Query: 177 ISIIDVFATDHAPHTVEEKNSENPPPGYPGLE 82 ++ + VFAT HT N PPPG+ G + Sbjct: 213 VTEVPVFATTTTTHTFTTNNGPPPPPGFQGFQ 244 >U97015-5|AAB52344.2| 362|Caenorhabditis elegans Hypothetical protein F48C1.2 protein. Length = 362 Score = 29.5 bits (63), Expect = 3.1 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 413 RRFSHALHEYKQAFFWANFGNVSAKLSYPLTESCKSF 523 R FS L ++++AFF+ N N ++K Y CK+F Sbjct: 152 RSFSGVLLKFQEAFFFVNKLNYTSKSIYLDGHGCKNF 188 >AF067218-1|AAC17021.1| 1451|Caenorhabditis elegans Hypothetical protein K10E9.1 protein. Length = 1451 Score = 28.7 bits (61), Expect = 5.4 Identities = 11/48 (22%), Positives = 25/48 (52%) Frame = -2 Query: 479 KHFQSWPKKMPVCTHAEREKTAAVILMASLLDRPVHICHVARKEEILI 336 +HF WP+ + + + AV A+L ++ V +C + + ++L+ Sbjct: 398 RHFSKWPQNLTLPIQKQTINCMAVFFEANLDNQLVDLCQWSDRRKVLV 445 >U97003-5|AAB52272.1| 353|Caenorhabditis elegans Hypothetical protein F47C10.7 protein. Length = 353 Score = 27.9 bits (59), Expect = 9.5 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = -1 Query: 420 NRRCHFNGISP*SACTHLSRSTKRRNINYQSRKRKRC 310 N CH G+ +AC R I YQ R K+C Sbjct: 23 NASCHNYGVLTCNACKMFFRRVVIEQITYQCRNWKKC 59 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,075,316 Number of Sequences: 27780 Number of extensions: 403913 Number of successful extensions: 987 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 943 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 985 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2077023564 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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