Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301F12f
         (399 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   229   4e-61
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   2.1  
AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like pro...    28   2.1  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    27   5.0  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical pr...    26   8.7  
AF016450-13|AAB65988.2|  472|Caenorhabditis elegans Hypothetical...    26   8.7  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  229 bits (561), Expect = 4e-61
 Identities = 104/131 (79%), Positives = 112/131 (85%)
 Frame = +3

Query: 3   YRYCKNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAG 182
           YRY KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E LSSEALEA 
Sbjct: 9   YRYIKNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAA 68

Query: 183 RICCNKYLVKNCGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVAR 362
           RIC NKY+VKNCGKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG VAR
Sbjct: 69  RICANKYMVKNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVAR 128

Query: 363 VRIGQPIMSXR 395
           V IG  + S R
Sbjct: 129 VDIGDILFSMR 139


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 343 GLPNAPRIPVWSLSAPA 293
           G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248


>AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like
           protein 2 protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 39  RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 185
           R C  +   K  I D  K+ A ++     + +++ EYEQ++S   +AG+
Sbjct: 93  RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -1

Query: 264  RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 88
            RG   V+  + ++   +S++  TY    +  PK LSSA   R++ S    +S QRS  S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936

Query: 87   PNRR 76
             +++
Sbjct: 1937 HHQK 1940


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
           protein R11A8.7d protein.
          Length = 1427

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -1

Query: 264 RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 88
           RG   V+  + ++   +S++  TY    +  PK LSSA   R++ S    +S QRS  S+
Sbjct: 700 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 757

Query: 87  PNRR 76
            +++
Sbjct: 758 HHQK 761


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = -1

Query: 264  RGKGEVSCGYGTD-PFRSSLRGTYCSRYVLPPKPLSSAVHIRRTPSARTVESRQRSLSSY 88
            RG   V+  + ++   +S++  TY    +  PK LSSA   R++ S    +S QRS  S+
Sbjct: 1879 RGNLSVASSFSSEGTSKSAVDSTYAPSSI--PKSLSSASIARQSASPIPQQSSQRSAKSH 1936

Query: 87   PNRR 76
             +++
Sbjct: 1937 HHQK 1940


>Z83127-5|CAB05628.2|  575|Caenorhabditis elegans Hypothetical
           protein T23F6.5 protein.
          Length = 575

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 208 TRYLLQQIRPASKASELSCSYSSDTKC 128
           T  L+   +P  K  E +C++  DTKC
Sbjct: 423 TAKLIVLNKPKIKCEETNCNFEKDTKC 449


>AF016450-13|AAB65988.2|  472|Caenorhabditis elegans Hypothetical
           protein B0238.9 protein.
          Length = 472

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/55 (21%), Positives = 26/55 (47%)
 Frame = +1

Query: 19  INRIRNRGSVGVYLIPRSVSSIWVRRERPLTTFHCACTWCPTNMNS*AQRLWRQD 183
           + R+ + GS   + +P+  +++W R+ + L    C C      M    Q L+ ++
Sbjct: 82  VKRLASLGSARGWTVPQRRNNLWERKGQSLIGKFCRCRCDRGQMTRDKQALYEKE 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,307,792
Number of Sequences: 27780
Number of extensions: 221680
Number of successful extensions: 676
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)