Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0121.Seq
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 17/79 (21%), Positives = 33/79 (41%)
 Frame = -3

Query: 259 GTIAGKSELASXRVPVTPQAYDEVDLISEIVGASSESHQTFLHRRKVPILRKECVIQNCR 80
           G +  K +       +  +  +E  +++E V     S      R  +P +     + + +
Sbjct: 356 GRVIAKGDSFVDLFALMEKVEEEKKMVNEFVKGFGNSETEEFERINIPKMLTLVDLSSVK 415

Query: 79  LDEHHHAFVMNEPVY*LNE 23
           L EH   + + EPVY LN+
Sbjct: 416 LSEHAFDYSIAEPVY-LND 433


>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
           protein F26H9.8 protein.
          Length = 1377

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 17/79 (21%), Positives = 33/79 (41%)
 Frame = -3

Query: 259 GTIAGKSELASXRVPVTPQAYDEVDLISEIVGASSESHQTFLHRRKVPILRKECVIQNCR 80
           G +  K +       +  +  +E  +++E V     S      R  +P +     + + +
Sbjct: 356 GRVIAKGDSFVDLFALMEKVEEEKKMVNEFVKGFGNSETEEFERINIPKMLTLVDLSSVK 415

Query: 79  LDEHHHAFVMNEPVY*LNE 23
           L EH   + + EPVY LN+
Sbjct: 416 LSEHAFDYSIAEPVY-LND 433


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,130,953
Number of Sequences: 27780
Number of extensions: 196296
Number of successful extensions: 589
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)