Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b08r
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83238-4|CAB05795.1|  341|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p...    29   3.4  
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.      29   3.4  
U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF100669-11|AAK39270.2|  737|Caenorhabditis elegans Dipeptidyl p...    28   7.9  

>Z83238-4|CAB05795.1|  341|Caenorhabditis elegans Hypothetical
           protein T08G3.5 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = -2

Query: 477 FSANFIRIPAR---FENRHSRIARTSYEDRSRLV 385
           F++ F+ IPA    FENR++ + RT Y  +SR +
Sbjct: 103 FTSVFLTIPAMIMFFENRYNYLVRTDYMTKSRKI 136


>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
           protein F55H2.6 protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 594 RPGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHP 701
           +P E +   PSD L P+  LP C+   L  +++  P
Sbjct: 168 QPEEKKEPKPSDILPPDHALPGCKERSLAHLLVPQP 203


>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
           protein F55H2.6 protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 594 RPGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHP 701
           +P E +   PSD L P+  LP C+   L  +++  P
Sbjct: 168 QPEEKKEPKPSDILPPDHALPGCKERSLAHLLVPQP 203


>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
          Length = 1247

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 594 RPGETRRVHPSDTLVPECTLPPCERGPLLRVMLQHP 701
           +P E +   PSD L P+  LP C+   L  +++  P
Sbjct: 168 QPEEKKEPKPSDILPPDHALPGCKERSLAHLLVPQP 203


>U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical
           protein F37A4.3 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 522 NRNKICVMTTQQEGPCMSAVGGRARPGETRRVHP 623
           N N   +M TQQ  P  S   G A  G+ + +HP
Sbjct: 148 NFNYCIIMRTQQNSPFFSNRRGNALHGDLKTLHP 181


>AF100669-11|AAK39270.2|  737|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 5 protein.
          Length = 737

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/53 (22%), Positives = 27/53 (50%)
 Frame = -2

Query: 543 LRKFYCDYTMLFFPKEVILEQKFSANFIRIPARFENRHSRIARTSYEDRSRLV 385
           L+  Y D   +  P +  +E+K    FI++   ++NR  ++ + + + R  L+
Sbjct: 20  LKDLYGDLAQIPIPTQGRIEKKSGDEFIKVTTTWDNRAMQLNKLTRQQRVSLI 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,370,686
Number of Sequences: 27780
Number of extensions: 419811
Number of successful extensions: 1210
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)