BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_D15 (940 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical... 101 7e-22 AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic avoid... 33 0.22 AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory cha... 33 0.22 U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated p... 32 0.68 U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. 32 0.68 Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 31 1.6 AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 31 1.6 U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 30 2.7 U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.7 U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 30 2.7 AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 29 3.6 AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 29 3.6 Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 29 4.8 AL034488-1|CAA22455.1| 625|Caenorhabditis elegans Hypothetical ... 29 4.8 Z75714-7|CAB00064.2| 270|Caenorhabditis elegans Hypothetical pr... 29 6.3 U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 29 6.3 U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 29 6.3 U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 29 6.3 J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 29 6.3 AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical ... 29 6.3 AL034488-6|CAA22450.2| 467|Caenorhabditis elegans Hypothetical ... 29 6.3 Z79755-5|CAB02110.2| 244|Caenorhabditis elegans Hypothetical pr... 28 8.4 Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 28 8.4 Z30973-2|CAA83221.2| 163|Caenorhabditis elegans Hypothetical pr... 28 8.4 AF036701-5|AAB88367.1| 125|Caenorhabditis elegans Hypothetical ... 28 8.4 >AL034393-13|CAA22317.1| 340|Caenorhabditis elegans Hypothetical protein Y18D10A.17 protein. Length = 340 Score = 101 bits (242), Expect = 7e-22 Identities = 49/75 (65%), Positives = 58/75 (77%) Frame = +2 Query: 203 MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQSQ 382 MS+ P +GSKISLISK DIRYEG L+TVD + TIALA VRSFGTE R T PVA + Sbjct: 1 MSNQTPYIGSKISLISKLDIRYEGILYTVDTNDSTIALAKVRSFGTEKRPTANPVAARDD 60 Query: 383 VYDYILFRGSDIKDI 427 VY+YI+F+ SDIKD+ Sbjct: 61 VYEYIIFKASDIKDL 75 >AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic avoidance abnormal protein9 protein. Length = 937 Score = 33.5 bits (73), Expect = 0.22 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +3 Query: 660 SQQNASRSGTPAVGVHRKSPTADQSIQV 743 SQ++ S + TP +G+HR +P AD I+V Sbjct: 841 SQEDRSEASTPNLGIHRTTPKADSPIRV 868 >AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory channel protein. Length = 937 Score = 33.5 bits (73), Expect = 0.22 Identities = 13/28 (46%), Positives = 20/28 (71%) Frame = +3 Query: 660 SQQNASRSGTPAVGVHRKSPTADQSIQV 743 SQ++ S + TP +G+HR +P AD I+V Sbjct: 841 SQEDRSEASTPNLGIHRTTPKADSPIRV 868 >U80438-4|AAB37634.2| 1415|Caenorhabditis elegans Uncoordinated protein 40 protein. Length = 1415 Score = 31.9 bits (69), Expect = 0.68 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +2 Query: 446 SFNAQ*SCHYADVCTPNSGYW---TSSWAVCGAV*PSSCWTNSISSVSSNGWLSKWS 607 +FN Q + Y+ N + T +WA + P++ + ++ +V+SNG LS WS Sbjct: 876 AFNTQYTVRYSTAVDGNQHRYVNSTETWATVEGLRPATEYEFAVRAVASNGQLSTWS 932 >U70618-1|AAB17088.1| 1415|Caenorhabditis elegans unc-40 protein. Length = 1415 Score = 31.9 bits (69), Expect = 0.68 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +2 Query: 446 SFNAQ*SCHYADVCTPNSGYW---TSSWAVCGAV*PSSCWTNSISSVSSNGWLSKWS 607 +FN Q + Y+ N + T +WA + P++ + ++ +V+SNG LS WS Sbjct: 876 AFNTQYTVRYSTAVDGNQHRYVNSTETWATVEGLRPATEYEFAVRAVASNGQLSTWS 932 >Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical protein K08E3.4 protein. Length = 643 Score = 30.7 bits (66), Expect = 1.6 Identities = 20/73 (27%), Positives = 31/73 (42%) Frame = +3 Query: 447 PSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLNK 626 P+ P A + PP PAP Y Q++ P V ++ P P++ PS +Q + Sbjct: 470 PAPPTFLAPTPVIAPPPPEPTPAPSHYASQYDAPPVHESFEPAVPPVSA-PSHYASQYDA 528 Query: 627 TSSMLDLIGGGSQ 665 +D SQ Sbjct: 529 PPEPIDSHSSSSQ 541 >AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting protein (scaffoldprotein) protein 1 protein. Length = 998 Score = 30.7 bits (66), Expect = 1.6 Identities = 15/40 (37%), Positives = 22/40 (55%) Frame = +3 Query: 459 NDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQY 578 NDP++ +P +LG+ P+P + PV GQ PQY Sbjct: 264 NDPSVCSYRLPSSLGSAPSPSP--PRPLSPVFGQPAPPQY 301 >U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical protein T25F10.6a protein. Length = 406 Score = 29.9 bits (64), Expect = 2.7 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = +3 Query: 483 SVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVH--NQLNKTSSMLDLIGG 656 + PP P PG+ F + Q + +G PS +H +L ++ ++ I Sbjct: 49 AAPPASLKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPSTIHTKEKLMRSEGIIP-IQA 107 Query: 657 GSQQNASRSGTPAVGVHR 710 GS + AS+ G GV R Sbjct: 108 GSNKYASQKGMTGFGVPR 125 >U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical protein T25F10.6b protein. Length = 301 Score = 29.9 bits (64), Expect = 2.7 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = +3 Query: 483 SVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVH--NQLNKTSSMLDLIGG 656 + PP P PG+ F + Q + +G PS +H +L ++ ++ I Sbjct: 49 AAPPASLKSPTPGRQQVNFTPSIPQSVLRKQQNYSSGKPSTIHTKEKLMRSEGIIP-IQA 107 Query: 657 GSQQNASRSGTPAVGVHR 710 GS + AS+ G GV R Sbjct: 108 GSNKYASQKGMTGFGVPR 125 >U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family protein 6 protein. Length = 287 Score = 29.9 bits (64), Expect = 2.7 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +2 Query: 68 CKRCACCQLPVSHFVVCSDLFG 133 C RC+CCQL +S F C G Sbjct: 43 CLRCSCCQLSLSSFKKCFSRHG 64 >AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer formation protein16, isoform a protein. Length = 530 Score = 29.5 bits (63), Expect = 3.6 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Frame = +3 Query: 516 PGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLNKT------SSMLDLIGGGSQQN-- 671 P ++ Q N+P P+ Q M P + N LN T SS+ IGGG+Q + Sbjct: 35 PHHHLNQHNNPYHPMHPHHQLPHMQQLPQPLLN-LNMTTLTSSGSSVASSIGGGAQCSPC 93 Query: 672 ASRSGTPAVGVHRKSPTADQSI 737 AS S T A ++ T Q + Sbjct: 94 ASGSSTAATNSSQQQQTVGQML 115 >AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-related transcriptionfactor DAF-16b protein. Length = 530 Score = 29.5 bits (63), Expect = 3.6 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 8/82 (9%) Frame = +3 Query: 516 PGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHNQLNKT------SSMLDLIGGGSQQN-- 671 P ++ Q N+P P+ Q M P + N LN T SS+ IGGG+Q + Sbjct: 35 PHHHLNQHNNPYHPMHPHHQLPHMQQLPQPLLN-LNMTTLTSSGSSVASSIGGGAQCSPC 93 Query: 672 ASRSGTPAVGVHRKSPTADQSI 737 AS S T A ++ T Q + Sbjct: 94 ASGSSTAATNSSQQQQTVGQML 115 >Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical protein R07B5.9 protein. Length = 657 Score = 29.1 bits (62), Expect = 4.8 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Frame = +3 Query: 435 LNNVPSMP--NDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGV 608 +N P P + P Q + P G+G P +H Q+ PMAG P+ V Sbjct: 388 INTTPQQPPFSHPNSQQQATP---GSGGVPSCGPAYTHHTPEQQSQQFMSPPMAGMPASV 444 Query: 609 -HNQLNKTSSMLDLIGG 656 N S+ ++++GG Sbjct: 445 ASNHSIHNSNSIEMVGG 461 >AL034488-1|CAA22455.1| 625|Caenorhabditis elegans Hypothetical protein Y54G11A.1 protein. Length = 625 Score = 29.1 bits (62), Expect = 4.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 577 IIQWLAFQVEFTTSSTRRAQCLTSLVEDPNKMHL 678 +I + F + T ST CL S +EDP+++HL Sbjct: 11 LILIITFLIFTDTVSTSSDPCLDSQIEDPSQLHL 44 >Z75714-7|CAB00064.2| 270|Caenorhabditis elegans Hypothetical protein ZC434.4 protein. Length = 270 Score = 28.7 bits (61), Expect = 6.3 Identities = 11/40 (27%), Positives = 25/40 (62%) Frame = +3 Query: 72 NAALVANFPSVILLFVLIYSVDSFSVFEIVENLCHRNRSS 191 N+ +V+N P+ + V++ +D F+ FE+ E+ R+ ++ Sbjct: 55 NSIIVSNIPAFVGEGVVLAIIDQFASFEVEESFVQRSNTA 94 >U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein 1, isoform b protein. Length = 369 Score = 28.7 bits (61), Expect = 6.3 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 441 NVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQT-PYPQ--YHPMAGFPSGVH 611 ++P+ P P +++S PP P P +Y + + P PQ + PM +H Sbjct: 143 DIPAPPRPPPPVELSPPPR---PPPPPEYDEEEETRAFWERYPLPQASHQPMLAAAHNLH 199 Query: 612 NQLNKTSS 635 N+L + SS Sbjct: 200 NELKQWSS 207 >U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein 1, isoform a protein. Length = 1010 Score = 28.7 bits (61), Expect = 6.3 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 441 NVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQT-PYPQ--YHPMAGFPSGVH 611 ++P+ P P +++S PP P P +Y + + P PQ + PM +H Sbjct: 784 DIPAPPRPPPPVELSPPPR---PPPPPEYDEEEETRAFWERYPLPQASHQPMLAAAHNLH 840 Query: 612 NQLNKTSS 635 N+L + SS Sbjct: 841 NELKQWSS 848 >U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein 1, isoform c protein. Length = 999 Score = 28.7 bits (61), Expect = 6.3 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 441 NVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQT-PYPQ--YHPMAGFPSGVH 611 ++P+ P P +++S PP P P +Y + + P PQ + PM +H Sbjct: 784 DIPAPPRPPPPVELSPPPR---PPPPPEYDEEEETRAFWERYPLPQASHQPMLAAAHNLH 840 Query: 612 NQLNKTSS 635 N+L + SS Sbjct: 841 NELKQWSS 848 >J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.elegans vinculin (deb-1) gene, complete cds. ). Length = 1010 Score = 28.7 bits (61), Expect = 6.3 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 441 NVPSMPNDPAIMQMSVPPTLGTGPAPGQYVGQFNHPVVGQT-PYPQ--YHPMAGFPSGVH 611 ++P+ P P +++S PP P P +Y + + P PQ + PM +H Sbjct: 784 DIPAPPRPPPPVELSPPPR---PPPPPEYDEEEETRAFWERYPLPQASHQPMLAAAHNLH 840 Query: 612 NQLNKTSS 635 N+L + SS Sbjct: 841 NELKQWSS 848 >AL117206-9|CAL22706.1| 292|Caenorhabditis elegans Hypothetical protein Y67A10A.11 protein. Length = 292 Score = 28.7 bits (61), Expect = 6.3 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +2 Query: 470 HYADVCTPNSGYWTSSWAVCGAV*PSSCWTNSISSVSSN 586 +Y C P+ GYWT +W+ V + W S + +S + Sbjct: 111 NYTLACCPDGGYWT-TWSGYSKVSNQAAWQRSRTCLSGS 148 >AL034488-6|CAA22450.2| 467|Caenorhabditis elegans Hypothetical protein Y54G11A.7 protein. Length = 467 Score = 28.7 bits (61), Expect = 6.3 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 543 HPVVGQTPYPQYHPMAG-FPSGVHNQLNKTSSMLDLIGGGS 662 H + Y +Y G F + N+ NKT+S+LD++ S Sbjct: 257 HTALFHIEYAEYESALGIFDREIANRFNKTNSLLDMVDASS 297 >Z79755-5|CAB02110.2| 244|Caenorhabditis elegans Hypothetical protein F43G9.8 protein. Length = 244 Score = 28.3 bits (60), Expect = 8.4 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +1 Query: 739 RLVQALAAQVTRDSNADTPAXHDXT 813 RL++ + T+D N++TP+ HD T Sbjct: 132 RLLKPTQKRTTKDGNSETPSTHDGT 156 >Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical protein F38B7.3 protein. Length = 407 Score = 28.3 bits (60), Expect = 8.4 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +3 Query: 465 PAIMQMSVPPTLGTG----PAPGQYV--GQFNHPVVGQTPYPQYHPMAGFPSGVH 611 P + S PP + G PA GQ G P GQ P P Y AG P+ H Sbjct: 164 PPTVYPSAPPPVQPGYNPRPASGQSYPSGPQVPPAYGQYPQPGYPQPAGVPTSSH 218 >Z30973-2|CAA83221.2| 163|Caenorhabditis elegans Hypothetical protein B0284.3 protein. Length = 163 Score = 28.3 bits (60), Expect = 8.4 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +2 Query: 482 VCTPNSGYWTSSWAVCGAV*PSSCWTNSISSVSSNGWLSKWSSQPAQQ 625 +C +S +S WAV + PSSC +ISS+++ S S +P+ + Sbjct: 90 ICKQSSS--SSEWAVWASPVPSSCHPANISSIATKCKKSFPSEKPSNE 135 >AF036701-5|AAB88367.1| 125|Caenorhabditis elegans Hypothetical protein ZC416.2 protein. Length = 125 Score = 28.3 bits (60), Expect = 8.4 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = +3 Query: 483 SVPPTLGTGPAPGQYVGQFNHPVVGQTPYPQYHPMAGFPSGVHN 614 + PP P P Y G N+ G PYP P +P G +N Sbjct: 3 NAPPPYTAQPQP--YYGNANYAPQGSNPYPAQGP---YPQGYYN 41 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,564,434 Number of Sequences: 27780 Number of extensions: 467091 Number of successful extensions: 1312 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1249 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1310 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2423194158 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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