Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30119
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 147 5e-36
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 77 6e-15
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 77 6e-15
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 33 0.12
AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical ... 29 1.5
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 29 2.0
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 28 3.4
U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z83123-5|CAB05611.1| 332|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 147 bits (356), Expect = 5e-36
Identities = 77/160 (48%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Frame = +3
Query: 39 AFADAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGDKDRLTWDIHFWLGS 218
A A+ G+K GL +WRI F VP+ G+FY GD+YI L D WD+HFWLG
Sbjct: 9 ALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG---CWDVHFWLGK 65
Query: 219 RTSQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHASGFS 398
S DE G AAI TV +DD G QHRE+Q YES FL YF IRY+ GG+ SG+
Sbjct: 66 NASTDEIGVAAIKTVEIDDS-LGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGYR 124
Query: 399 HVTIN-EGTEKRLFQIKGKRNVRVKQVKPTFESLNNGDCF 515
HV + + LF KGKRNVR +V+ SLN GD F
Sbjct: 125 HVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVF 164
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 77.4 bits (182), Expect = 6e-15
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +3
Query: 48 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 224
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 225 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 401
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 402 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCF 515
T RL++ + G V ++ V + ESL+ CF
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCF 659
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 69 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 161
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 77.4 bits (182), Expect = 6e-15
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Frame = +3
Query: 48 DAGRKPGLEIWRIENFEPVAVPKTQFGLFYSGDSYIVLNTTGD-KDRLTWDIHFWLGSRT 224
D G G+ +W IENF P + + G FY D+Y+VL TT + +L I +WLG
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 225 SQDEAGAAAILTVNLDDEQFQGSAVQHREVQYYESKEFLEYFSPAIRYLKGGHA-SGFSH 401
S D+ +A+ V L + + RE E++EFL F I Y++GG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRN-HLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-Y 620
Query: 402 VTINEGTEKRLFQ--IKGKRNVRVKQVKPTFESLNNGDCF 515
T RL++ + G V ++ V + ESL+ CF
Sbjct: 621 TTEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCF 659
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +3
Query: 69 LEIWRIENFEPVAVPKTQFGLFYSGDSYIVL 161
+E + +E + V +P+ +FG+FY+ D Y+ L
Sbjct: 903 MESFVLEGKKFVKLPQKEFGIFYTMDCYVFL 933
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 273 DEQFQGSAVQHREVQYY---ESKEFLEYFSPAIRYLKGGHASGFSHVTINEGTEKRLFQI 443
DE+ + AV+ E + E E LE AI ++G S ++ + L Q+
Sbjct: 165 DERIRLDAVKIDEEAFAVVEEEPEKLETQEQAIAAIQGAKQLLKSPTKVSPYPDVMLIQV 224
Query: 444 KGKRNVRVKQVKPTFESLNNGDCF 515
+G +NV V+ V P S++ CF
Sbjct: 225 RGSKNVDVRLVAPAMSSVHEVACF 248
>AC024824-3|AAK85501.1| 543|Caenorhabditis elegans Hypothetical
protein Y55B1BR.1 protein.
Length = 543
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 103 SPFRRLSSVSSTPGTPTLY*TP 168
SP +R SSV + PGTP +Y P
Sbjct: 105 SPRKRFSSVETNPGTPRIYLPP 126
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 29.1 bits (62), Expect = 2.0
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Frame = +1
Query: 7 ARDLKCLKYTKHSRMPAGSRVSKYGGLRTSNRSPFRRLSSVSSTPG--TPTLY*TPQAIR 180
A ++ K T HS + R + R+ ++SP RR S S G TP + ++
Sbjct: 279 AAEISRRKSTSHSTSLSKRRYLRSRS-RSLSKSPARRRSRHLSRSGSRTPAQRHSRRSES 337
Query: 181 TV*H--GTSISGSARGPARTKPARRPSSR-------*TWTTNNSRDQRYSTERSNIT--- 324
T G +R P R +P RR SR WT SR + + S +T
Sbjct: 338 TSRRRSGRHSRSRSRSPPRKRPVRRSRSRSRSRTPNRNWTRARSRTRSQAKSSSTLTWPL 397
Query: 325 SPRSS*NISHQPSAI*KADTPQASAT*RSMREQRNDSSRSRVKETSALSR*NRH 486
SP S + S++ + K D + + R+ + S + R K + SR RH
Sbjct: 398 SPSRSRSNSNERNLKEKKDRKKKKS--EKKRKHHSKSRKHRSKRSE--SREERH 447
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 269 GRRTIPGISGTAPRGPILRVQG--VPRIFLTSHPLFKRRTRLRLQP 400
G +P S AP GPI+ G VP + T++ + +L+ QP
Sbjct: 167 GHHQVPAQSPIAPAGPIVNTPGSLVPPLHFTANIMNPTTVQLKWQP 212
>U41540-5|AAK39229.2| 666|Caenorhabditis elegans Hypothetical
protein F35H12.4 protein.
Length = 666
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 125 RSLLLRGLLHCTEHHRR 175
+SLLLRGL+ +HHRR
Sbjct: 579 KSLLLRGLMAARKHHRR 595
>Z83123-5|CAB05611.1| 332|Caenorhabditis elegans Hypothetical
protein T04A11.8 protein.
Length = 332
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +2
Query: 305 PRGPILRVQGVPRIFLTSHPLFKRR---TRLRLQPRD 406
P G L + VP +F +HP FKR+ +R+ + PR+
Sbjct: 291 PFGYDLELCVVPLVFYFTHPAFKRKKSESRISVNPRN 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,186,912
Number of Sequences: 27780
Number of extensions: 255951
Number of successful extensions: 731
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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