Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10c03
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 227 3e-60
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 227 3e-60
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 153 6e-38
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 152 1e-37
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 152 1e-37
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 98 4e-21
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 81 7e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 74 6e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 61 4e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 61 4e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 46 2e-05
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 44 7e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 2e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 40 9e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 40 9e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.014
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 36 0.025
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 36 0.025
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 36 0.025
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.077
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 33 0.13
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.31
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 2.9
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 3.8
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 8.8
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 8.8
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 8.8
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 227 bits (556), Expect = 3e-60
Identities = 108/122 (88%), Positives = 112/122 (91%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGGXIEPSLRILAMKYXCEKMICRKCYARLHPRATNCRKTKCGHTNN 425
IQKESTLHLVLRLRGG IEPSLR LA KY C+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120
Query: 426 LR 431
LR
Sbjct: 121 LR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 227 bits (556), Expect = 3e-60
Identities = 108/122 (88%), Positives = 112/122 (91%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGGXIEPSLRILAMKYXCEKMICRKCYARLHPRATNCRKTKCGHTNN 425
IQKESTLHLVLRLRGG IEPSLR LA KY C+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSE 120
Query: 426 LR 431
LR
Sbjct: 121 LR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein 1,
isoform a protein.
Length = 838
Score = 153 bits (372), Expect = 6e-38
Identities = 78/92 (84%), Positives = 81/92 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 747 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 806
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGGXI 299
GKQL DGRTLSDYNIQKESTLHLVLRLRGG I
Sbjct: 807 GKQLEDGRTLSDYNIQKESTLHLVLRLRGGDI 838
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 671 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 731 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 151 bits (366), Expect = 3e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (363), Expect = 7e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTL GKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 151 bits (366), Expect = 3e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 150 bits (363), Expect = 7e-37
Identities = 76/90 (84%), Positives = 79/90 (87%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTL GKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 96.3 bits (229), Expect = 1e-20
Identities = 49/61 (80%), Positives = 52/61 (85%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 204 G 206
G
Sbjct: 503 G 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 63 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 122
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 123 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 152
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 139 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 198
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 199 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 215 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 274
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 275 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 291 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 350
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 351 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 367 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 426
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 427 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 456
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 443 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 502
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 503 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 532
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 519 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 578
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 579 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 595 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 654
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 655 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 684
Score = 152 bits (369), Expect = 1e-37
Identities = 77/90 (85%), Positives = 80/90 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 671 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 730
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGG 293
GKQL DGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 731 GKQLEDGRTLSDYNIQKESTLHLVLRLRGG 760
Score = 152 bits (369), Expect = 1e-37
Identities = 77/92 (83%), Positives = 81/92 (88%)
Frame = +3
Query: 24 KKS*ILRVVYFSNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFA 203
K+S + V+ MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFA
Sbjct: 747 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA 806
Query: 204 GKQLXDGRTLSDYNIQKESTLHLVLRLRGGXI 299
GKQL DGRTLSDYNIQK+STLHLVLRLRGG I
Sbjct: 807 GKQLEDGRTLSDYNIQKQSTLHLVLRLRGGDI 838
Score = 151 bits (366), Expect = 3e-37
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 246 IQKESTLHLVLRLRGG 293
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 97.9 bits (233), Expect = 4e-21
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
M I VKTLTGK I L++E +D +E +K +++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 246 IQKESTLHLVLRLRGG 293
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 80.6 bits (190), Expect = 7e-16
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 245
+ + VKTL GKTI + ++ +DT+E +K +Q+K G+PPDQQRLIF QL + R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 246 IQKESTLHLVLRLR 287
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 37.5 bits (83), Expect = 0.006
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 87 LTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTL 266
+TG IT VEASD I+++ + + + P ++ D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 267 HL 272
L
Sbjct: 152 RL 153
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 57 SNTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGI 173
S TM + VKT TGKTIT+E +NVK ++DK+G+
Sbjct: 56 SKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.1 bits (174), Expect = 6e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIP 176
MQIFVKTLTGKTITLEVEASDTIENVKA IQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +3
Query: 72 IFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQ 251
+FVKTL +T+ LEV A++ + ++K I+ EGIP ++QRL +AG+QL D SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 252 KESTLHLVLRLRGG 293
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 61.3 bits (142), Expect = 4e-10
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = +3
Query: 72 IFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQ 251
+FVKTL +T+ LEV A++ + ++K I+ EGIP ++QRL +AG+QL D SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 252 KESTLHLVLRLRGG 293
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 55.6 bits (128), Expect = 2e-08
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 69 QIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNI 248
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+L D ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 249 QKESTLHLVLR 281
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/72 (40%), Positives = 37/72 (51%)
Frame = +3
Query: 69 QIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNI 248
Q FV+ L GKT TL V ASDT+E K + R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 249 QKESTLHLVLRL 284
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.0 bits (99), Expect = 7e-05
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQL---XDGRTLS 236
++I+V+ G+T TL+ ASDT+ +VKA I +K I P+ Q+L+ L D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 237 DYNIQKESTLHL 272
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGI 173
M + +KT TGK IT+E S VK ++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 48 VYFSNTMQIFVKTLTGKTITLEV 116
V + +FVKT TGKTIT+ +
Sbjct: 175 VSIEKEIDVFVKTYTGKTITISI 197
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +3
Query: 72 IFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGK 209
+FVKTL +T+ LEV A++ + ++K I+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/61 (39%), Positives = 30/61 (49%)
Frame = +3
Query: 90 TGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLH 269
+G L V SDTI VK I + R++ K L D TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 270 L 272
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 40.3 bits (90), Expect = 9e-04
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +3
Query: 87 LTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTL 266
+ G + ++ + + +K IQD+ G+P +Q+L+ G + D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 267 HLVLRLRGG 293
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 40.3 bits (90), Expect = 9e-04
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = +3
Query: 87 LTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTL 266
+ G + ++ + + +K IQD+ G+P +Q+L+ G + D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 267 HLVLRLRGG 293
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 108 LEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLR 287
L V SDTI ++K I + R++ GK L D +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEG--IPPDQQRLIFAGKQLXDGRTLSD 239
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L D + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 240 YNIQKESTLHLVLRLR 287
+ ++L R
Sbjct: 112 VGFDSSKFVVVMLSKR 127
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +3
Query: 108 LEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTL 266
L V SDTI +K I GI R K L D TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 63 TMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDY 242
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 243 NIQKESTLHLVLR 281
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 35.5 bits (78), Expect = 0.025
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 63 TMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDY 242
T+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 20 TIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAA 79
Query: 243 NIQKESTLHLVLR 281
I T+HLV R
Sbjct: 80 GISDGQTVHLVDR 92
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.077
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +3
Query: 81 KTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKES 260
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 261 TLHLV 275
+ L+
Sbjct: 73 QIMLL 77
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/66 (25%), Positives = 38/66 (57%)
Frame = +3
Query: 84 TLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKEST 263
++ G+ ++ +++E +K I+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 264 LHLVLR 281
+ L++R
Sbjct: 207 VELLVR 212
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.9 bits (69), Expect = 0.31
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 87 LTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTL 266
L G I +E+++ DTI V + G+ +QRL+ K+L +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 351 CRKCYARLHPRATNCRKTKCGHT 419
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 MQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGIPPDQQRLIFAGKQLXDGR-TLSDY 242
M + +KT TGKTIT+E S VK ++ K+G+ AG Q+ + T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 243 NIQK 254
IQ+
Sbjct: 56 KIQE 59
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +3
Query: 60 NTMQIFVKTLTGKTITLEVEASDTIENVKAXIQDKEGI 173
+ +Q+ + + TGK++ + VE + +E D+EG+
Sbjct: 1147 DVLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGV 1184
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 165 EGIP-PDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGXIEPSLRI 317
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 165 EGIP-PDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGXIEPSLRI 317
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 165 EGIP-PDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVLRLRGGXIEPSLRI 317
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,395
Number of Sequences: 27780
Number of extensions: 243610
Number of successful extensions: 668
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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