Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0112
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical pr...    39   0.004
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical
           protein C16A3.4 protein.
          Length = 375

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = +1

Query: 334 LNGASDGNCCSCCGVGPFETRAQQTAHYKHHWHTFNLKRKLFGKSPLSIGQYN 492
           ++G++   C +C  V  FET   Q  HYK  WH +NLKR+      + I  +N
Sbjct: 1   MDGSTGFTCVTCRVV--FETAELQRDHYKTEWHRYNLKRQAAELPAIGIELFN 51


>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
            protein F10F2.1 protein.
          Length = 2507

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +1

Query: 181  PEAVKTKIVKVYEIDEFQKLLKGVHVAACMITESHNVIDEQSVLRRLNALTLNGASDGNC 360
            PE  K +  ++ E ++ +K+LKG+       + SH ++DE  + +    +    +S   C
Sbjct: 1637 PEGEKNEEPEISEQEKIRKVLKGLFSKRQNSSGSHELVDESDIDKWAQEVDPTPSSQSAC 1696

Query: 361  CS 366
             S
Sbjct: 1697 FS 1698


>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
            F10F2.1 protein.
          Length = 2507

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +1

Query: 181  PEAVKTKIVKVYEIDEFQKLLKGVHVAACMITESHNVIDEQSVLRRLNALTLNGASDGNC 360
            PE  K +  ++ E ++ +K+LKG+       + SH ++DE  + +    +    +S   C
Sbjct: 1637 PEGEKNEEPEISEQEKIRKVLKGLFSKRQNSSGSHELVDESDIDKWAQEVDPTPSSQSAC 1696

Query: 361  CS 366
             S
Sbjct: 1697 FS 1698


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,874,822
Number of Sequences: 27780
Number of extensions: 314838
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)