Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A24
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical p... 89 6e-18
Z75526-7|CAE17729.1| 325|Caenorhabditis elegans Hypothetical pr... 37 0.018
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 31 0.90
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 31 0.90
AF067942-11|AAG45576.2| 406|Caenorhabditis elegans Downstream o... 31 1.6
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 29 6.3
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U80840-12|AAB37925.1| 694|Caenorhabditis elegans Hypothetical
protein F08D12.1 protein.
Length = 694
Score = 88.6 bits (210), Expect = 6e-18
Identities = 55/198 (27%), Positives = 94/198 (47%)
Frame = +1
Query: 52 MSANKENNLVQAYLELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFK 231
M+ L Q ++++ S DY++AL +A K+++ P E AF CK+V +QL +
Sbjct: 1 MADASAGGLYQCLTDISRADTSGDYQKALTSANKLIRKYPKETFAFKCKLVAQIQLSQYA 60
Query: 232 EALATLTNAKNSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 411
+AL + + + FEKAY YR + EA++ +++ + EL+AQ+ Y+
Sbjct: 61 DALELIRKTPAHQMG-HVGFEKAYIHYRQDELDEAIKELNTCDKDDVKALELKAQVFYKQ 119
Query: 412 EQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELAYNSG 591
E YQ Y++Y LLKN +D+ DE + + E++Y YN
Sbjct: 120 ENYQQAYDIYLYLLKNHSDD-SDELRRANFLAVQARLEAQGVKQAVAETEDSYSQLYNRA 178
Query: 592 STLAMRGKYNEALSVLKE 645
K +AL L++
Sbjct: 179 CVEIEAEKLPQALESLEK 196
>Z75526-7|CAE17729.1| 325|Caenorhabditis elegans Hypothetical
protein C06H2.7 protein.
Length = 325
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +1
Query: 94 ELNKFCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSAL 273
E+ K S+ +R A + Q + + C V L + F E +AT+ N K+ +
Sbjct: 159 EILKIFNKSNIQRVQLRAETVSQQTKDLINSLECMNV-ELNIGKFDEMVATVNNIKDLRI 217
Query: 274 AADLLFEKAYTQYRLNSPK-EALQTVDSAPELTPALKELRA 393
LLF + T +RLN + A T S P + + E RA
Sbjct: 218 RQQLLFFQLITIFRLNIARINASVTAASLPLIVECINEWRA 258
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 635 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 537
T + S++FPR PE Y YV S+C S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 635 TDKASLYFPRIAKVLPELYANSYVFSSNCGSSD 537
T + S++FPR PE Y YV S+C S+
Sbjct: 281 TTQKSIFFPRDRDYPPEFYTEPYVVLSSCSESE 313
>AF067942-11|AAG45576.2| 406|Caenorhabditis elegans Downstream of
daf-16 (regulatedby daf-16) protein 19 protein.
Length = 406
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -2
Query: 665 RTGLFGSSLRTDKASLYFPRIAKV---LPELYANSY 567
+T +F + + TDKA LYF + K LP Y +Y
Sbjct: 190 KTQIFSNPMHTDKADLYFANVEKFSISLPAFYLKTY 225
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 199 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELT 369
++CF N F +AL N N +LA+ +L K + +NSPK + + +DSA +L
Sbjct: 740 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 799
Query: 370 PALKELRAQILYRLE 414
++ YR+E
Sbjct: 800 CNEYDILKPFQYRIE 814
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +1
Query: 199 VVCFLQLHN--FKEALATLTNAK-NSALAADLLFEKAYTQYRLNSPKEALQTVDSAPELT 369
++CF N F +AL N N +LA+ +L K + +NSPK + + +DSA +L
Sbjct: 460 LICFRAKSNDMFNKALLYRCNETGNVSLASCVLQNKFVIRMCINSPKCSEEDLDSAYKLI 519
Query: 370 PALKELRAQILYRLE 414
++ YR+E
Sbjct: 520 CNEYDILKPFQYRIE 534
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = -3
Query: 616 TSPALPKCCPSCMPI--RMCFHQTAAAL 539
T+PA +C PSCMP + C QT AA+
Sbjct: 122 TTPAPVQCQPSCMPACEQSCVVQTPAAV 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,482,381
Number of Sequences: 27780
Number of extensions: 361523
Number of successful extensions: 991
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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