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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40079
         (666 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   4.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   4.6  
EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.0  
EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.0  
EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.0  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.0  
EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.0  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    21   8.0  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   8.0  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   8.0  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 118 FPTQEIRASTFVNLARRERV 59
           FP   I A +F+ L RR+RV
Sbjct: 177 FPALNIVADSFIELIRRQRV 196


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 504 LPALKYVPAYVVYIW 460
           L ++  +P Y++YIW
Sbjct: 537 LSSMLCIPGYMIYIW 551


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 504 LPALKYVPAYVVYIW 460
           L ++  +P Y++YIW
Sbjct: 590 LSSMLCIPGYMIYIW 604


>EF127805-1|ABL67942.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 6 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 370 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 403


>EF127804-1|ABL67941.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 5 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 370 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 403


>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 370 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 403


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 370 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 403


>EF127801-1|ABL67938.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 370 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 403


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 370 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 403


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 438 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 471


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +3

Query: 321 YPTPIVKDEPQTVPSAASTPPLSPIDMDTQEKIK 422
           + TPI    P TV   +++ PLS +  +    +K
Sbjct: 438 FGTPISTGRPATVEDTSASLPLSGMQEELHTILK 471


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,361
Number of Sequences: 438
Number of extensions: 3705
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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