Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30058
         (848 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   1.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.5  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              23   2.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   4.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.2  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   8.2  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 450 SPVETHCSNVDYFIPDENNEPKASQT 527
           S +E  CS +DYF P+E   P  S +
Sbjct: 112 SRMEYECSRIDYF-PNEEYSPDPSDS 136


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 549 ICSLFIASSERPLVRCSRRE 490
           +C +F+  ++ P+VR S RE
Sbjct: 674 VCGVFLKHNDTPVVRASGRE 693


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 18  DRIH-EFL-LNSECAVVFSVPLCLRKCCIGEP 107
           D +H +FL +N EC V  S  LC+ K     P
Sbjct: 119 DDVHRKFLHVNDECDVALSFKLCMLKAMRNYP 150


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 781 VLKDNSSIWYDWSYILAWLSVG 846
           + KD S  W+D+S +  W+  G
Sbjct: 492 IFKDKSD-WFDYSEVSKWVQKG 512


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 535 EQATYGSVNGGVVHCGVLDVV 597
           ++ T+ SVNG  VH G ++ V
Sbjct: 119 QECTFISVNGKEVHSGNIEAV 139


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -3

Query: 624 PTTPVQKAMNNVKNATMNNATVDRAICSLFIAS 526
           P T +  A NN      N+ ++DR+  ++++ S
Sbjct: 332 PNTFILVAENNTTMVFCNDLSIDRSTNTMYVLS 364


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +2

Query: 719 GVEFYEKEKVVGEEFINNGPTY*KTTHRYGTTGRTSSPG 835
           GVEF + E    +EF+ +   Y     +Y T       G
Sbjct: 509 GVEFQKIELKQCDEFVEDSDDYWNCVIQYNTRAENHQTG 547


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,952
Number of Sequences: 438
Number of extensions: 4829
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)