Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV10438
         (419 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               24   0.80 
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    22   2.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.3  

>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.8 bits (49), Expect = 0.80
 Identities = 11/37 (29%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = +3

Query: 63  ISSAELRHLLSTLGEKLSDD-EVEQLLQGQEDSQGNI 170
           +S  ++R+ +  +G    D  ++++LLQ ++ S+GNI
Sbjct: 32  VSMKDIRYCIIHMGLTFKDFIKMQELLQEEDISEGNI 68


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 132 QLLQGQEDSQGNINYENF 185
           Q +QG+E +  ++N ENF
Sbjct: 35  QEMQGKEKNSASLNSENF 52


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 60  THCHLCQNGADPQ*SH*QCR 1
           T C  C+ G  P  +H  CR
Sbjct: 624 TQCISCRQGTVPDETHSACR 643


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,713
Number of Sequences: 438
Number of extensions: 1822
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)