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Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30004
         (843 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    25   1.2  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   4.7  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   6.2  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   6.2  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   6.2  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   6.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.2  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   8.1  

>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 87

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 87 CKCGRAVPLVPNSCSPGGSTSS 22
          C+C  A P    +CS G S+ S
Sbjct: 5  CECDLATPRTGTNCSSGSSSDS 26


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 28  SGSPGAAGIRHERHG 72
           +GSPG+ GIR ++ G
Sbjct: 285 NGSPGSGGIRSDQMG 299


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 96  NNYNNYNKHNYNKLY 110


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 329 NNYNNYNKHNYNKLY 343


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 687 NNYFYYHKLNVNTLY 643
           NNY  Y+K N N LY
Sbjct: 329 NNYNNYNKHNYNKLY 343


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 95  TVTVSVGGPCRSCRIPAAPGDPLVLERXA 9
           + T SV   CR  R   A  +PL+ E+ A
Sbjct: 92  STTTSVTPSCRRQRYNIAAANPLLAEKLA 120


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
          receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +3

Query: 42 GCRNSARAARPAHTYS 89
          GC  SA  ARP   YS
Sbjct: 10 GCTRSAHFARPGGDYS 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,239
Number of Sequences: 438
Number of extensions: 4453
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).