BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0222.Seq (357 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 1.9 AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 1.9 AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 5.8 >DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein protein. Length = 430 Score = 22.2 bits (45), Expect = 1.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 169 NSWIVARRTSAKAFAKGVFINQERXLEVRRRLDTALVLTVN 47 N +VAR A F V IN+ + R+ L+ T+N Sbjct: 351 NQAVVARHDEAMIFPADVKINRGLXWIISDRMPVFLLXTLN 391 >AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc finger domain-Z3 isoform protein. Length = 92 Score = 22.2 bits (45), Expect = 1.9 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -2 Query: 182 TLEVKFLDRRKTNXSESICQRCFHQSRTK--XRGSKAIRYRPSS 57 +L+ F D+ + + + +C+ C + RTK K++++R SS Sbjct: 20 SLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGSS 63 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 20.6 bits (41), Expect = 5.8 Identities = 7/17 (41%), Positives = 11/17 (64%) Frame = -2 Query: 158 RRKTNXSESICQRCFHQ 108 RR+ N +E++C F Q Sbjct: 966 RRRLNVNETVCSDYFSQ 982 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 87,000 Number of Sequences: 438 Number of extensions: 1392 Number of successful extensions: 4 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 51 effective length of database: 124,005 effective search space used: 8308335 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 39 (20.8 bits)
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