BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0210.Seq (895 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.6 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.6 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.6 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.6 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.6 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.6 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.6 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 8.7 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 Score = 21.8 bits (44), Expect = 8.7 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = +2 Query: 338 VKRESLNDCRNDGTTDCS 391 ++ E N RNDG CS Sbjct: 237 LRHEDRNSYRNDGERSCS 254 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 22.2 bits (45), Expect = 6.6 Identities = 7/26 (26%), Positives = 17/26 (65%) Frame = +2 Query: 281 VEINVRRILSTRIRKVSDAVKRESLN 358 +++++ R+L + SD +KR+ +N Sbjct: 128 IKVDIHRVLPGKPTTTSDELKRDIIN 153 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 21.8 bits (44), Expect = 8.7 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = -3 Query: 725 NAVPSISKI*SNIYSTNYXISHTVPYSRS 639 NA+ S + + +N+YST HT+ + S Sbjct: 396 NALASHNNLLNNVYSTPGPHHHTMGHGHS 424 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 202,762 Number of Sequences: 438 Number of extensions: 3650 Number of successful extensions: 18 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 18 length of database: 146,343 effective HSP length: 58 effective length of database: 120,939 effective search space used: 28904421 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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